Gene: tulp4a

Basic information

Tag Content
Uniprot ID E7EXF2
Entrez ID 557730
Genbank protein ID
Genbank nucleotide ID NM_001045095.1
Ensembl protein ID ENSDARP00000067485
Ensembl nucleotide ID ENSDARG00000045911
Gene name TUB-like protein 4a
Gene symbol tulp4a
Organism Danio rerio
NCBI taxa ID 7955
Cleft type
Developmental stage
Data sources Homology search
Reference
Functional description
Sequence
MFAAVEHGPV LCSDSNILCL SWKGRVPRSQ KEKPVCRRRY CEEGWLATGN GRGVVGVTFT 60
SSHCRRDRNT PQRINFNLRG HNSEVVLVRW NEPFQKLATC DTDGGIFVWI QYEGRWSVEL 120
VNDRGAQVSD FTWSHDGTQA LISYRDGFVL VGSVSGQRHW SSEINLESQI TCGIWTPDDQ 180
QVLFGTADGQ VIVMDCHGRM LAHILLHEAE GIASMAWNYP SFLVEDSSES DSDSDDSTPP 240
QVHTLKPLLT VCFTSGDISL MSNYDDLSPL LIRTGLKDVV VQWSSQGDLL AVAGMERLVT 300
SDPTQATRNA IVKFYNVRGE HIYSLETPAQ RPISTLCWGH RDSRVFLACG PALYVLRVEH 360
RVSSLQLLCQ QAIASAVHEE KDLAKLSMPS RLSTYVSSAF APTIKPPIPD PNNMRDFVSY 420
PTSGNERLHC TMKRTEDNPE VGGPCYTLYL EYLGGLVPIL KGRRISKLRP EFVIMDPKTD 480
GKTDEVYGNS FIPSMIDSCN CSDSSDIELN DDWVGKKSPK ISRGSKSPKL PRDLVCPFTN 540
RINIDPRKSP KLSRTTQEIS RSPRLPIRKP SIGSPSLTRR EFPLDDITQH NYLAQVTSNI 600
WGTKFKIVGL AAFLPTNLGA VIYKTSLLHL QPRQMTIYLP EVRKISVEYI NLPMFSPNVF 660
SEDEDDLPVT GASGITDDNP PCTVNIPIAP IHSPAQAMSP TQSIGLVQSL LANQNVQLDV 720
LSNPTSTVAP PGVSDQGQHD TVLTAQYTVP ARYSSPGQLQ HQQMQQQLQQ QHQMQIPVPT 780
LPSGQPSCPV IQLPQSTIPV AAPTAEHSTE RGEHELLLKI KTTRSAPQLA EGDAVVFTAP 840
LEISKMNPPP PYPGTVAAAV AAATAAVSAA ASASSTSGAV GSSSSTSSSG EVCLKKGDLT 900
LYPPSAQGAQ YPTPLGYERI TTFDSSGNVE EVCRPRTRLV CNQNVYTLQG PGSSATLRVS 960
SSSSAVEGKK VQLPYASATL NRLTVPRYSI PSGDPPPYPD TANQGGAGRN PGQRLDSSLI 1020
HATLRRNSRE AALKVSQMLD HQRTLPPKAK ASTLSASYQP RGPTALYTCS QCSSNSSGTT 1080
SSGSNGIAGG TIIRQDFPPT GGAAPHSTVI VHSNSASPLP SQSSYSLLSL DGTGGVATGA 1140
GNRERADYIN SAFTEDEALN QSLRQMALNT EVVGLTVKRP PPYQWDPSVT EEIWVPQERT 1200
ATLPPSGPPA PHKPPPLILG PAQHLDVSRL PFVLSPKSPT SPNNTTFPLA GAYQIALPYP 1260
SSAAYSSPPL QAVQASPRPP SPKEAVAPLS FPQQDQSVVL PPGYPPNLPN LACCPLPPMY 1320
PGTASCSSLP VTAIPLHPWG SYNPCPPMPS PPGPAPSLPP KASHMLDKPV RSPPPQPPPL 1380
PSPPPDLQTA VSPPEAIAEA GEGFQEVLSL NESPVPQRAD RFGKKNRKRL DNTRADEANV 1440
PAITEGGNKS KKEGRALGDF NSLISSPRLG GRDKKKPKGQ KEQLKAKKLS KATTNEFQDS 1500
SESEPELFIS GDELMNQSQS GKKSWKAKRN LRAGGCELDE IKCRKANEKE DRGLGSQGFV 1560
YIMANKQPLW NEATQVYQLD FGGRVTQESA KNFQIELEGR QVMQFGRIDG NAYILDFQYP 1620
FSAVQAFAVA LANVTQRLK 1639

Abbreviation :
CLO : cleft lip only. CPO : cleft palate only. CLP : cleft lip and palate. CL/P : cleft lip with/without cleft palate.
For humans: CL/P, CLO, CPO, and CLP. For mice: CLO, CLP, and CPO.

Protein disorder information

Orthologous information

Relation Gene symbol Entrez ID UniProt ID Cleft type Developmental stage Species Evidence Details
1:1 orthologTULP4484053F1P9V3Canis lupus familiarisPredictionMore>>
1:1 orthologTULP4A0A452DPT9Capra hircusPredictionMore>>
1:1 orthologTULP456995Q9NRJ4Homo sapiensPublicationMore>>
1:1 orthologTulp468842Q3UH13Mus musculusPredictionMore>>
1:1 orthologTULP4A0A2I3S4L4Pan troglodytesPredictionMore>>
1:1 orthologTulp4499016D3ZFM2Rattus norvegicusPredictionMore>>
1:1 orthologtulp4a557730E7EXF2Danio rerioPredictionMore>>

Gene ontology

GO ID GO Term
GO:0016567 protein ubiquitination

Functional annotations

Keywords

Keyword ID Keyword Term
KW-1185 Reference proteome
KW-0853 WD repeat

Interpro

InterPro ID InterPro Term
IPR001496 SOCS_box
IPR025659 Tubby-like_C
IPR000007 Tubby_C
IPR015943 WD40/YVTN_repeat-like_dom_sf
IPR001680 WD40_repeat
IPR017986 WD40_repeat_dom
IPR036322 WD40_repeat_dom_sf

PROSITE

PROSITE ID PROSITE Term
PS50225 SOCS
PS50082 WD_REPEATS_2
PS50294 WD_REPEATS_REGION

Pfam

Pfam ID Pfam Term
PF01167 Tub