| Tag | Content |
|---|---|
| Uniprot ID | E7FBR0 |
| Entrez ID | 797838 |
| Genbank protein ID | |
| Genbank nucleotide ID | XM_001338263.5 |
| Ensembl protein ID | ENSDARP00000069093 |
| Ensembl nucleotide ID | ENSDARG00000052705 |
| Gene name | Plakophilin 1b |
| Gene symbol | pkp1b |
| Organism | Danio rerio |
| NCBI taxa ID | 7955 |
| Cleft type | |
| Developmental stage | |
| Data sources | Homology search |
| Reference | |
| Functional description | |
| Sequence | MMPEPLKSAL SLGNMEDTSL AVPSDIEHRS AQQRVLEQVH TIKKSKSKYR SKSKSVSALA 60 TSPTSPEGDS VFYDFKFSPG TSLSGPSFNR GGNMTNGAMQ RQNILRKSTN SRSSSGQQVN 120 SNSGRFDRSI YGFQGSVSTQ QKTSNQLYNK STRSAPDLGF QPTTNGMSST GQRSQTSRQT 180 FQRWEKGSQM PSSSYSNGTT LVRMSNSNQV NAVSRRPSSL QSNGESRMSM IRSGQAKDFS 240 GMTLEKPVSD MTMRDAVDCL SSTDENVQLC GASYIQHSTF NDDKAKQEVL TLKGLPLLVD 300 LLGSSSPQVQ ETVAAALRNA IFKNLPNKQE VQRSGGIKQA AQLLGDANTE TQKHLTGLLW 360 NLSSEDGLKP DLLRTALPAL TEKVIEPFSA NTVDNANTSL APEVFCNATA CLRNLSGSKL 420 ANRQSMRNCK GLIDSLMRYT ENCITAGMPD NQSLENCVCI LHNLTYQLET EMPTLFNKIN 480 ALASQSHNRS SSSDAGPIIC FRLQSQKLKQ RGFDYPVMED NNPEGVGWLF HSKALQFYLN 540 LLSSSERDAT LEACCGTLQN LTANEGIVSN FLSQTIVQKL NGMKFITPLL QSTNPALQNS 600 AVALLGNLSK SSQTNKVMAP QSLPQLVGFL NSGLSKKESS PEYDSAMATA LRSANTLINA 660 DPDTGKNLLN NSLINNLYNM SLNRDLQKSS KASALLLHNL WSNKNIQSFL KKNGMKKKSF 720 VNEVTSAAFK SHLVID 736 |
Abbreviation :
CLO : cleft lip only. CPO : cleft palate only.
CLP : cleft lip and palate. CL/P : cleft lip with/without cleft palate.
For humans: CL/P, CLO, CPO, and CLP. For mice: CLO, CLP, and CPO.
| Relation | Gene symbol | Entrez ID | UniProt ID | Cleft type | Developmental stage | Species | Evidence | Details |
|---|---|---|---|---|---|---|---|---|
| 1:1 ortholog | PKP1 | A0A452FUQ9 | Capra hircus | Prediction | More>> | |||
| 1:1 ortholog | PKP1 | 5317 | Q13835 | Homo sapiens | Publication | More>> | ||
| 1:1 ortholog | Pkp1 | 18772 | P97350 | Mus musculus | Prediction | More>> | ||
| 1:1 ortholog | PKP1 | A0A2J8KHS3 | Pan troglodytes | Prediction | More>> | |||
| 1:1 ortholog | PKP1 | I3LGN8 | Sus scrofa | Prediction | More>> | |||
| 1:1 ortholog | Pkp1 | 304822 | D3ZY51 | Rattus norvegicus | Prediction | More>> | ||
| 1:1 ortholog | pkp1b | 797838 | E7FBR0 | Danio rerio | Prediction | More>> |
| GO ID | GO Term |
|---|---|
| GO:0005912 | adherens junction |
| GO:0005737 | cytoplasm |
| GO:0030057 | desmosome |
| GO:0005634 | nucleus |
| GO:0005886 | plasma membrane |
| GO:0045296 | cadherin binding |
| GO:0098609 | cell-cell adhesion |
| GO:0007043 | cell-cell junction assembly |
| GO:0045110 | intermediate filament bundle assembly |
| PROSITE ID | PROSITE Term |
|---|---|
| PS50176 | ARM_REPEAT |
| Pfam ID | Pfam Term |
|---|---|
| PF00514 | Arm |