Gene:

Basic information

Tag Content
Uniprot ID F2Z568
Entrez ID 100516393
Genbank protein ID HDC01581.1
Genbank nucleotide ID XM_003357990.3; XM_005668640.2;
Ensembl protein ID
Ensembl nucleotide ID
Gene name 60S ribosomal protein L38
Gene symbol
Organism Sus scrofa
NCBI taxa ID 9823
Cleft type
Developmental stage
Data sources Homology search
Reference
Functional description
Sequence
MPRKIEEIKD FLLTARRKDA KSVKIKKNKD NVKFKVRCSR YLYTLVITDK EKAEKLKQSL 60
PPGLAVKELK

Abbreviation :
CLO : cleft lip only. CPO : cleft palate only. CLP : cleft lip and palate. CL/P : cleft lip with/without cleft palate.
For humans: CL/P, CLO, CPO, and CLP. For mice: CLO, CLP, and CPO.

Protein disorder information

Orthologous information

Relation Gene symbol Entrez ID UniProt ID Cleft type Developmental stage Species Evidence Details
1:1 orthologRPL38A0A452G9G0Capra hircusPredictionMore>>
1:1 orthologRPL38100630893F7AB94Equus caballusPredictionMore>>
1:1 orthologRPL386169P63173Homo sapiensPredictionMore>>
1:1 orthologRpl3867671Q9JJI8CPO,CLP,CLOMus musculusPublicationMore>>
1:1 orthologRPL38745405A0A2J8KC40Pan troglodytesPredictionMore>>
1:1 ortholog100516393F2Z568Sus scrofaPredictionMore>>
1:1 orthologrpl38436759Q6DGL9Danio rerioPredictionMore>>

Gene ontology

GO ID GO Term
GO:0022625 cytosolic large ribosomal subunit
GO:0033291 eukaryotic 80S initiation complex
GO:0042788 polysomal ribosome
GO:0014069 postsynaptic density
GO:0003735 structural constituent of ribosome
GO:0034463 90S preribosome assembly
GO:0048318 axial mesoderm development
GO:0002181 cytoplasmic translation
GO:0042474 middle ear morphogenesis
GO:0001503 ossification
GO:0006417 regulation of translation
GO:0022618 ribonucleoprotein complex assembly
GO:0007605 sensory perception of sound
GO:0001501 skeletal system development

Functional annotations

Keywords

Keyword ID Keyword Term
KW-0002 3D-structure
KW-0687 Ribonucleoprotein
KW-0689 Ribosomal protein

Interpro

InterPro ID InterPro Term
IPR002675 Ribosomal_L38e
IPR038464 Ribosomal_L38e_sf

PROSITE

PROSITE ID PROSITE Term

Pfam

Pfam ID Pfam Term
PF01781 Ribosomal_L38e