| Tag | Content |
|---|---|
| Uniprot ID | Q9JJI8 |
| Entrez ID | 67671 |
| Genbank protein ID | BAB22266.1; BAB03500.1; BAB28208.1; AAH55346.1; BAB26814.1; BAB27000.1; |
| Genbank nucleotide ID | NM_001048057.1; NM_001048058.1; XM_006534009.2; XM_017314720.1; NM_023372.2; |
| Ensembl protein ID | ENSMUSP00000102213; ENSMUSP00000080741; ENSMUSP00000102211; ENSMUSP00000102209; |
| Ensembl nucleotide ID | ENSMUSG00000057322 |
| Gene name | 60S ribosomal protein L38 |
| Gene symbol | Rpl38 |
| Organism | Mus musculus |
| NCBI taxa ID | 10090 |
| Cleft type | CPO,CLP,CLO |
| Developmental stage | |
| Data sources | Manually collected |
| Reference | 10889952; 21529712; |
| Functional description | |
| Sequence | MPRKIEEIKD FLLTARRKDA KSVKIKKNKD NVKFKVRCSR YLYTLVITDK EKAEKLKQSL 60 PPGLAVKDLK |
Abbreviation :
CLO : cleft lip only. CPO : cleft palate only.
CLP : cleft lip and palate. CL/P : cleft lip with/without cleft palate.
For humans: CL/P, CLO, CPO, and CLP. For mice: CLO, CLP, and CPO.
| Relation | Gene symbol | Entrez ID | UniProt ID | Cleft type | Developmental stage | Species | Evidence | Details |
|---|---|---|---|---|---|---|---|---|
| 1:1 ortholog | RPL38 | A0A452G9G0 | Capra hircus | Prediction | More>> | |||
| 1:1 ortholog | RPL38 | 100630893 | F7AB94 | Equus caballus | Prediction | More>> | ||
| 1:1 ortholog | RPL38 | 6169 | P63173 | Homo sapiens | Prediction | More>> | ||
| 1:1 ortholog | Rpl38 | 67671 | Q9JJI8 | CPO,CLP,CLO | Mus musculus | Publication | More>> | |
| 1:1 ortholog | RPL38 | 745405 | A0A2J8KC40 | Pan troglodytes | Prediction | More>> | ||
| 1:1 ortholog | 100516393 | F2Z568 | Sus scrofa | Prediction | More>> | |||
| 1:1 ortholog | rpl38 | 436759 | Q6DGL9 | Danio rerio | Prediction | More>> |
| GO ID | GO Term | Evidence |
|---|---|---|
| GO:0003735 | structural constituent of ribosome | IBA |
| GO ID | GO Term | Evidence |
|---|---|---|
| GO:0001501 | skeletal system development | IMP |
| GO:0001501 | skeletal system development | TAS |
| GO:0001503 | ossification | IMP |
| GO:0002181 | cytoplasmic translation | ISO |
| GO:0006417 | regulation of translation | IMP |
| GO:0007605 | sensory perception of sound | IMP |
| GO:0022618 | ribonucleoprotein complex assembly | IBA |
| GO:0034463 | 90S preribosome assembly | IDA |
| GO:0042474 | middle ear morphogenesis | IMP |
| GO:0048318 | axial mesoderm development | IMP |
| GO ID | GO Term | Evidence |
|---|---|---|
| GO:0014069 | postsynaptic density | ISO |
| GO:0022625 | cytosolic large ribosomal subunit | ISO |
| GO:0022625 | cytosolic large ribosomal subunit | IBA |
| GO:0033291 | eukaryotic 80S initiation complex | IDA |
| GO:0042788 | polysomal ribosome | ISO |
| GO:0045202 | synapse | EXP |
| GO:0045202 | synapse | IDA |
| Reactome ID | Reactome Term | Evidence |
|---|---|---|
| R-MMU-156827 | L13a-mediated translational silencing of Ceruloplasmin expression | IEA |
| R-MMU-1799339 | SRP-dependent cotranslational protein targeting to membrane | IEA |
| R-MMU-392499 | Metabolism of proteins | IEA |
| R-MMU-6791226 | Major pathway of rRNA processing in the nucleolus and cytosol | IEA |
| R-MMU-72312 | rRNA processing | IEA |
| R-MMU-72613 | Eukaryotic Translation Initiation | IEA |
| R-MMU-72689 | Formation of a pool of free 40S subunits | IEA |
| R-MMU-72706 | GTP hydrolysis and joining of the 60S ribosomal subunit | IEA |
| R-MMU-72737 | Cap-dependent Translation Initiation | IEA |
| R-MMU-72766 | Translation | IEA |
| R-MMU-8868773 | rRNA processing in the nucleus and cytosol | IEA |
| R-MMU-8953854 | Metabolism of RNA | IEA |
| R-MMU-927802 | Nonsense-Mediated Decay (NMD) | IEA |
| R-MMU-975956 | Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC) | IEA |
| R-MMU-975957 | Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC) | IEA |
| Pfam ID | Pfam Term |
|---|---|
| PF01781 | Ribosomal_L38e |