Gene: rpl38

Basic information

Tag Content
Uniprot ID Q6DGL9
Entrez ID 436759
Genbank protein ID AAI65519.1; AAH76322.1;
Genbank nucleotide ID NM_001002486.2
Ensembl protein ID ENSDARP00000112691; ENSDARP00000005837;
Ensembl nucleotide ID ENSDARG00000006413
Gene name 60S ribosomal protein L38
Gene symbol rpl38
Organism Danio rerio
NCBI taxa ID 7955
Cleft type
Developmental stage
Data sources Homology search
Reference
Functional description
Sequence
MPRKIEEIKD FLLTARRKDA KSVKIKKNKD NVKFKVRCSR YLYTLVITDK EKAEKLKQSL 60
PPGLAVKELK

Abbreviation :
CLO : cleft lip only. CPO : cleft palate only. CLP : cleft lip and palate. CL/P : cleft lip with/without cleft palate.
For humans: CL/P, CLO, CPO, and CLP. For mice: CLO, CLP, and CPO.

Protein disorder information

Orthologous information

Relation Gene symbol Entrez ID UniProt ID Cleft type Developmental stage Species Evidence Details
1:1 orthologRPL38A0A452G9G0Capra hircusPredictionMore>>
1:1 orthologRPL38100630893F7AB94Equus caballusPredictionMore>>
1:1 orthologRPL386169P63173Homo sapiensPredictionMore>>
1:1 orthologRpl3867671Q9JJI8CPO,CLP,CLOMus musculusPublicationMore>>
1:1 orthologRPL38745405A0A2J8KC40Pan troglodytesPredictionMore>>
1:1 ortholog100516393F2Z568Sus scrofaPredictionMore>>
1:1 orthologrpl38436759Q6DGL9Danio rerioPredictionMore>>

Gene ontology

GO ID GO Term
GO:0022625 cytosolic large ribosomal subunit
GO:0003735 structural constituent of ribosome
GO:0043009 chordate embryonic development
GO:0022618 ribonucleoprotein complex assembly
GO:0006412 translation

Functional annotations

Keywords

Keyword ID Keyword Term
KW-1267 Proteomics identification
KW-1185 Reference proteome
KW-0687 Ribonucleoprotein
KW-0689 Ribosomal protein

Interpro

InterPro ID InterPro Term
IPR002675 Ribosomal_L38e
IPR038464 Ribosomal_L38e_sf

PROSITE

PROSITE ID PROSITE Term

Pfam

Pfam ID Pfam Term
PF01781 Ribosomal_L38e