| Tag | Content |
|---|---|
| Uniprot ID | G1U8W9 |
| Entrez ID | 100352095 |
| Genbank protein ID | |
| Genbank nucleotide ID | XM_002718470.3 |
| Ensembl protein ID | ENSOCUP00000025887 |
| Ensembl nucleotide ID | ENSOCUG00000027029 |
| Gene name | AT-rich interaction domain 5B |
| Gene symbol | ARID5B |
| Organism | Oryctolagus cuniculus |
| NCBI taxa ID | 9986 |
| Cleft type | |
| Developmental stage | |
| Data sources | Homology search |
| Reference | |
| Functional description | |
| Sequence | MEPNSLQWVG SPCGLHGPYI FYKAFQFHLE GKPRILSLGD FFFVRCTPKD PICIAELQLL 60 WEERTSRQLL SSSKLYFLPE DTPQGRNSDH GEDEVIAVSE KVIVKLEDLV KWVHSDFSKW 120 RCGLQAGPVN TEALGRNGQK EALLKYRQST LNSGLNFKDV LKEKADLGED EEETNVIVLS 180 YPQYCRYRSM LKRIQDKPSS ILMDQFALAL GGIAVVSRNP QILYCRDTFD HPTLIENESI 240 CDEFAPNLKG RPRKKKPCPQ RRDSFSGVKD SNNNSDGKAV AKVKCEARSA LTKPKNNHNN 300 CKKVSNEEKP KLAIGEECRA DEQAFLVALY KYMKERKTPI ERIPYLGFKQ INLWTMFQAA 360 QKLGGYETIT ARRQWKHIYD ELGGNPGSTS AATCTRRHYE RLILPYERFI KGEEDKPLPP 420 IKPRKQENSS QENDNKTKVS GTKRIKHEMP KSKKEKENAP KPQDASEVSA EQEKEHETLN 480 QKNVTDPLPA TDVKKKVDGY QEVVARPLGS RADPEKDSET DQGSHSEKEA EESGEKAPAP 540 LLPDAPLAPE RDPAAKLGAG KQPLTPPSAL VDSKQESKPC CFTESPESDL PEAPFPSFPP 600 TQPPAASQSE ADEDKLPAMA DYIANCTVKV DQLGSDDIHN ALKQTPKVLV VQSFDMFKDK 660 DLTGPLNENH GLNYTPLLYS RGNPGIMSPL AKKKLLSQVS GAGLSSSYPY GSPPPLISKK 720 KLIARDDLCS GLSQTHHSQS TEHMAVSRPS VIQHVQSFKG KPSEERKSIN DIFKHDKLGR 780 ADAHRCSFSK HHHLNSLADS YILKQEMQEG KDKLLEKRAL PHSHMPSFLA DFYSSPHLHS 840 LYRHTEHHLH NEQPSKYPSR DMYRESENNS FPSHKHQEKL HVNYLASLHL QDKKVAAADA 900 PTDDQPTDLS LPKNPHKPTG KVLGLAHSAP GPQESKGMPQ FHVISSQSRD CHPKACRVSP 960 MTMSAPKKYP ESLSRSGKPH HVRLENFRKM EGMVHPILHR KMSPQNIGAA RPIKRSLEDL 1020 DLVIAGKKAR AVSPLDPSKE VSGKEKASEQ ESEGSKAAYG GHSGGGSEGH KLPLSSPIFP 1080 GLYSGSLCNS GLNSRLPAGY SHSLQYLKNQ TVLSPLMQPL AFHSLVMQRG IFTSPTNSQQ 1140 LYRHLAAATP VGSSYGDLLH NSIYPLAAIN PQAAFPSSQL SSVHPSTKL 1189 |
Abbreviation :
CLO : cleft lip only. CPO : cleft palate only.
CLP : cleft lip and palate. CL/P : cleft lip with/without cleft palate.
For humans: CL/P, CLO, CPO, and CLP. For mice: CLO, CLP, and CPO.
| Relation | Gene symbol | Entrez ID | UniProt ID | Cleft type | Developmental stage | Species | Evidence | Details |
|---|---|---|---|---|---|---|---|---|
| 1:1 ortholog | ARID5B | 479217 | J9NV13 | Canis lupus familiaris | Prediction | More>> | ||
| 1:1 ortholog | ARID5B | 102169735 | A0A452F8Y8 | Capra hircus | Prediction | More>> | ||
| 1:1 ortholog | ARID5B | 84159 | Q14865 | Homo sapiens | Prediction | More>> | ||
| 1:1 ortholog | Arid5b | 71371 | Q8BM75 | CPO | Mus musculus | Publication | More>> | |
| 1:1 ortholog | ARID5B | 745725 | K7DSK8 | Pan troglodytes | Prediction | More>> | ||
| 1:1 ortholog | ARID5B | 100352095 | G1U8W9 | Oryctolagus cuniculus | Prediction | More>> | ||
| 1:1 ortholog | arid5b | E7F888 | Danio rerio | Prediction | More>> |
| GO ID | GO Term |
|---|---|
| GO:0005634 | nucleus |
| GO:0003677 | DNA binding |
| GO:0003713 | transcription coactivator activity |
| GO:0060612 | adipose tissue development |
| GO:0051091 | positive regulation of DNA-binding transcription factor activity |
| PROSITE ID | PROSITE Term |
|---|---|
| PS51011 | ARID |
| Pfam ID | Pfam Term |
|---|---|
| PF01388 | ARID |