| Tag | Content |
|---|---|
| Uniprot ID | G3V736 |
| Entrez ID | |
| Genbank protein ID | EDM15233.1 |
| Genbank nucleotide ID | |
| Ensembl protein ID | ENSRNOP00000011356 |
| Ensembl nucleotide ID | ENSRNOG00000008332 |
| Gene name | Smoothened homolog |
| Gene symbol | Smo |
| Organism | Rattus norvegicus |
| NCBI taxa ID | 10116 |
| Cleft type | |
| Developmental stage | |
| Data sources | Homology search |
| Reference | |
| Functional description | |
| Sequence | MAAGRPVRGP ELAPRRLLQL LLLVLLGGRG RGAALSGNVT GPGPRSAGGS ARRNAPVTSP 60 PPPLLSHCGR AAHCEPLRYN VCLGSALPYG ATTTLLAGDS DSQEEAHSKL VLWSGLRNAP 120 RCWAVIQPLL CAVYMPKCEN DRVELPSRTL CQATRGPCAI VERERGWPDF LRCMPDHFPE 180 GCPNEVQNIK FNSSGQCEAP LVRTDNPKSW YEDVEGCGIQ CQNPLFTEAE HQDMHSYIAA 240 FGAVTGLCTL FTLATFVADW RNSNRYPAVI LFYVNACFFV GSIGWLAQFM DGARREIVCR 300 ADGTMRFGEP TSSETLSCVI IFVIVYYALM AGVVWFVVLT YAWHTSFKAL GTTYQPLSGK 360 TSYFHLLTWS LPFVLTVAIL AVAQVDGDSV SGICFVGYKN YRYRAGFVLA PIGLVLIVGG 420 YFLIRGVMTL FSIKSNHPGL LSEKAASKIN ETMLRLGIFG FLAFGFVLIT FSCHFYDFFN 480 QAEWERSFRD YVLCQANVTI GLPTKKPIPD CEIKNRPSLL VEKINLFAMF GTGIAMSTWV 540 WTKATLLIWR RTWCRLTGHS DDEPKRIKKS KMIAKAFSKR RELLQNPGQE LSFSMHTVSH 600 DGPVAGLAFE LNEPSADVSS AWAQHVTKMV ARRGAILPQD VSVTPVATPV PPEEQANLWL 660 VEAEISPELE KRLGRKKKRR KRKKEVCPLG PAPELHHSAP VPATSAVPRL PQLPRQKCLV 720 AANAWGTGEP CRQGAWTVVS NPFCPEPSPH QDPFLPGASA PRVWAQGRLQ GLGSIHSRTN 780 LMEAELLDAD SDF 793 |
Abbreviation :
CLO : cleft lip only. CPO : cleft palate only.
CLP : cleft lip and palate. CL/P : cleft lip with/without cleft palate.
For humans: CL/P, CLO, CPO, and CLP. For mice: CLO, CLP, and CPO.
| Relation | Gene symbol | Entrez ID | UniProt ID | Cleft type | Developmental stage | Species | Evidence | Details |
|---|---|---|---|---|---|---|---|---|
| 1:1 ortholog | SMO | 539308 | E1BE57 | Bos taurus | Prediction | More>> | ||
| 1:1 ortholog | SMO | 102171572 | A0A452FRY0 | Capra hircus | Prediction | More>> | ||
| 1:1 ortholog | SMO | 6608 | Q99835 | Homo sapiens | Prediction | More>> | ||
| 1:1 ortholog | Smo | 319757 | P56726 | CPO | E13.0, E14.5 | Mus musculus | Publication | More>> |
| 1:1 ortholog | SMO | 100515110 | F1SMQ3 | Sus scrofa | Prediction | More>> | ||
| 1:1 ortholog | Smo | G3V736 | Rattus norvegicus | Prediction | More>> | |||
| 1:1 ortholog | smo | 30225 | Q5RH73 | Danio rerio | Prediction | More>> |
| GO ID | GO Term |
|---|---|
| GO:0097731 | 9+0 non-motile cilium |
| GO:0005901 | caveola |
| GO:0060170 | ciliary membrane |
| GO:0005794 | Golgi apparatus |
| GO:0016021 | integral component of membrane |
| GO:0008144 | drug binding |
| GO:0005113 | patched binding |
| GO:0004888 | transmembrane signaling receptor activity |
| GO:0009952 | anterior/posterior pattern specification |
| GO:0048143 | astrocyte activation |
| GO:0060413 | atrial septum morphogenesis |
| GO:0001708 | cell fate specification |
| GO:0071397 | cellular response to cholesterol |
| GO:0021953 | central nervous system neuron differentiation |
| GO:0021696 | cerebellar cortex morphogenesis |
| GO:0021987 | cerebral cortex development |
| GO:0060242 | contact inhibition |
| GO:0021542 | dentate gyrus development |
| GO:0003140 | determination of left/right asymmetry in lateral mesoderm |
| GO:0021904 | dorsal/ventral neural tube patterning |
| GO:0060684 | epithelial-mesenchymal cell signaling |
| GO:0048853 | forebrain morphogenesis |
| GO:0031069 | hair follicle morphogenesis |
| GO:0001947 | heart looping |
| GO:0048873 | homeostasis of number of cells within a tissue |
| GO:0001701 | in utero embryonic development |
| GO:0070986 | left/right axis specification |
| GO:0060644 | mammary gland epithelial cell differentiation |
| GO:0072285 | mesenchymal to epithelial transition involved in metanephric renal vesicle formation |
| GO:0007494 | midgut development |
| GO:0035264 | multicellular organism growth |
| GO:0051451 | myoblast migration |
| GO:0043066 | negative regulation of apoptotic process |
| GO:0043392 | negative regulation of DNA binding |
| GO:0030857 | negative regulation of epithelial cell differentiation |
| GO:0051799 | negative regulation of hair follicle development |
| GO:0000122 | negative regulation of transcription by RNA polymerase II |
| GO:0001755 | neural crest cell migration |
| GO:0042475 | odontogenesis of dentin-containing tooth |
| GO:0001649 | osteoblast differentiation |
| GO:0061113 | pancreas morphogenesis |
| GO:0090190 | positive regulation of branching involved in ureteric bud morphogenesis |
| GO:0030335 | positive regulation of cell migration |
| GO:0050679 | positive regulation of epithelial cell proliferation |
| GO:0007228 | positive regulation of hh target transcription factor activity |
| GO:0002053 | positive regulation of mesenchymal cell proliferation |
| GO:0040018 | positive regulation of multicellular organism growth |
| GO:0002052 | positive regulation of neuroblast proliferation |
| GO:0046622 | positive regulation of organ growth |
| GO:0042307 | positive regulation of protein import into nucleus |
| GO:0045880 | positive regulation of smoothened signaling pathway |
| GO:0045944 | positive regulation of transcription by RNA polymerase II |
| GO:0034504 | protein localization to nucleus |
| GO:0050821 | protein stabilization |
| GO:2000826 | regulation of heart morphogenesis |
| GO:2000036 | regulation of stem cell population maintenance |
| GO:0048741 | skeletal muscle fiber development |
| GO:0048745 | smooth muscle tissue development |
| GO:0021938 | smoothened signaling pathway involved in regulation of cerebellar granule cell precursor cell proliferation |
| GO:0021910 | smoothened signaling pathway involved in ventral spinal cord patterning |
| GO:0061053 | somite development |
| GO:0021794 | thalamus development |
| GO:0003323 | type B pancreatic cell development |
| GO:0001570 | vasculogenesis |
| GO:0007371 | ventral midline determination |