Gene: PAX3

Basic information

Tag Content
Uniprot ID H2QJH9
Entrez ID
Genbank protein ID
Genbank nucleotide ID
Ensembl protein ID ENSPTRP00000022161
Ensembl nucleotide ID ENSPTRG00000012969
Gene name Paired box 3
Gene symbol PAX3
Organism Pan troglodytes
NCBI taxa ID 9598
Cleft type
Developmental stage
Data sources Homology search
Reference
Functional description
Sequence
MLPTAPRMTT LAGAVPRMMR PGPGQNYPRS GFPLEVSTPL GQGRVNQLGG VFINGRPLPN 60
HIRHKIVEMA HHGIRPCVIS RQLRVSHGCV SKILCRYQET GSIRPGAIGG SKPKQVTTPD 120
VEKKIEEYKR ENPGMFSWEI RDKLLKDAVC DRNTVPSVSS ISRILRSKFG KGEEEEADLE 180
RKEAEESEKK AKHSIDGILS ERASAPQSDE GSDIDSEPDL PLKRKQRRSR TTFTAEQLEE 240
LERAFERTHY PDIYTREELA QRAKLTEARV QVWFSNRRAR WRKQAGANQL MAFNHLIPGG 300
FPPTAMPTLP TYQLSETSYQ PTSIPQAVSD PSSTVHRPQP LPPSTVHQST IPSNPDSSSA 360
YCLPSTRHGF SSYTDSFVPP SGPSNPMNPT IGNGLSPQVM GLLTNHGGVP HQPQTDYALS 420
PLTGGLEPTT TVSASCSQRL DHMKSLDSLP TSQSYCPPTY STTGYSMDPV TGYQYGQYGQ 480
SKPWTF 486

Abbreviation :
CLO : cleft lip only. CPO : cleft palate only. CLP : cleft lip and palate. CL/P : cleft lip with/without cleft palate.
For humans: CL/P, CLO, CPO, and CLP. For mice: CLO, CLP, and CPO.

Protein disorder information

Orthologous information

Relation Gene symbol Entrez ID UniProt ID Cleft type Developmental stage Species Evidence Details
1:1 orthologPAX3540951F1MTX0Bos taurusPredictionMore>>
1:1 orthologPAX3A0A452FR15Capra hircusPredictionMore>>
1:1 orthologPAX35077P23760Homo sapiensPublicationMore>>
1:1 orthologPax318505P24610CPOE14.5Mus musculusPublicationMore>>
1:1 orthologPAX3H2QJH9Pan troglodytesPredictionMore>>
1:1 orthologPAX3I3LAG7Sus scrofaPredictionMore>>
1:1 orthologPax3114502F1LMV3Rattus norvegicusPredictionMore>>
1:1 orthologpax3aF1R7Y4Danio rerioPredictionMore>>

Gene ontology

GO ID GO Term
GO:0005634 nucleus
GO:0043565 sequence-specific DNA binding
GO:0007275 multicellular organism development
GO:0006355 regulation of transcription, DNA-templated

Functional annotations

Keywords

Keyword ID Keyword Term
KW-0217 Developmental protein
KW-0238 DNA-binding
KW-0371 Homeobox
KW-0539 Nucleus
KW-0563 Paired box
KW-1185 Reference proteome
KW-0804 Transcription
KW-0805 Transcription regulation

Interpro

InterPro ID InterPro Term
IPR009057 Homeobox-like_sf
IPR017970 Homeobox_CS
IPR001356 Homeobox_dom
IPR043182 PAIRED_DNA_bd_dom
IPR001523 Paired_dom
IPR022106 Pax7_C
IPR036388 WH-like_DNA-bd_sf

PROSITE

PROSITE ID PROSITE Term
PS00027 HOMEOBOX_1
PS50071 HOMEOBOX_2
PS00034 PAIRED_1
PS51057 PAIRED_2

Pfam

Pfam ID Pfam Term
PF00046 Homeodomain
PF00292 PAX
PF12360 Pax7