Gene: LHX8

Basic information

Tag Content
Uniprot ID H2R2T0; A0A2J8LKP2;
Entrez ID 469353
Genbank protein ID
Genbank nucleotide ID XM_016920884.1
Ensembl protein ID ENSPTRP00000044424
Ensembl nucleotide ID ENSPTRG00000000868
Gene name LIM homeobox 8
Gene symbol LHX8
Organism Pan troglodytes
NCBI taxa ID 9598
Cleft type
Developmental stage
Data sources Homology search
Reference
Functional description
Sequence
MSEECGRTTA LAAGRTRKGA GEEGLVSPEG AGDEDSCSSS APLSPSSSPR SMASGSGCPP 60
GKCVCNSCGL EIVDKYLLKV NDLCWHVRCL SCSVCRTSLG RHTSCYIKDK DIFCKLDYFR 120
RYGTRCSRCG RHIHSTDWVR RAKGNVYHLA CFACFSCKRQ LSTGEEFALV EEKVLCRVHY 180
DCMLDNLKRE VENGNGISVE GALLTEQDVN HPKPAKRART SFTADQLQVM QAQFAQDNNP 240
DAQTLQKLAE RTGLSRRVIQ VWFQNCRARH KKHVSPNHSS STPVTAVPPS RLSPPMLEEM 300
AYSAYVPQDG TMLTALHSYM DAHSPTTLGL QPLLPHSMTQ LPISHT 346

Abbreviation :
CLO : cleft lip only. CPO : cleft palate only. CLP : cleft lip and palate. CL/P : cleft lip with/without cleft palate.
For humans: CL/P, CLO, CPO, and CLP. For mice: CLO, CLP, and CPO.

Protein disorder information

Orthologous information

Relation Gene symbol Entrez ID UniProt ID Cleft type Developmental stage Species Evidence Details
1:1 orthologLHX8431707Q68G74Homo sapiensPublicationMore>>
1:1 orthologLhx816875O35652CPOE14.5Mus musculusPublicationMore>>
1:1 orthologLHX8469353H2R2T0Pan troglodytesPredictionMore>>
1:1 orthologLhx8365963G3V6V6Rattus norvegicusPredictionMore>>
1:1 orthologlhx8aA5PMV8Danio rerioPredictionMore>>

Gene ontology

GO ID GO Term
GO:0005634 nucleus
GO:0046872 metal ion binding
GO:0043565 sequence-specific DNA binding
GO:0006355 regulation of transcription, DNA-templated

Functional annotations

Keywords

Keyword ID Keyword Term
KW-0238 DNA-binding
KW-0371 Homeobox
KW-0440 LIM domain
KW-0479 Metal-binding
KW-0539 Nucleus
KW-1185 Reference proteome
KW-0677 Repeat
KW-0862 Zinc

Interpro

InterPro ID InterPro Term
IPR009057 Homeobox-like_sf
IPR017970 Homeobox_CS
IPR001356 Homeobox_dom
IPR001781 Znf_LIM

PROSITE

PROSITE ID PROSITE Term
PS00027 HOMEOBOX_1
PS50071 HOMEOBOX_2
PS00478 LIM_DOMAIN_1
PS50023 LIM_DOMAIN_2

Pfam

Pfam ID Pfam Term
PF00046 Homeodomain
PF00412 LIM