CleftGeneDB-Search

Gene: Snai1

Basic information

Tag	Content
Uniprot ID	Q6AY35; E9PU82;
Entrez ID	116490
Genbank protein ID	EDL96401.1; AAH79210.1;
Genbank nucleotide ID	NM_053805.1
Ensembl protein ID	ENSRNOP00000012939
Ensembl nucleotide ID	ENSRNOG00000009594
Gene name	Snail family transcriptional repressor 1
Gene symbol	Snai1
Organism	Rattus norvegicus
NCBI taxa ID	10116
Cleft type
Developmental stage
Data sources	Homology search
Reference
Functional description
Sequence	MPRSFLVRKP SDPRRKPNYS ELQDACVEFT FQQPYDQAHL LAAIPPPEVL NPAASLPTLI 60 WDSLLVPQVQ PVAWATLPLR ESPRAAELTS LSDEDSGKSS QPPSPPSPAP SSFSSTSASS 120 LEAEAFIAFP GLGQLPKQLA RLSVAKDPQS RKAFNCKYCN KEYLSLGALK MHIRSHTLPC 180 VCTTCGKAFS RPWLLQGHVR THTGEKPFSC SHCNRAFADR SNLRAHLQTH SDVKRYQCQA 240 CARTFSRMSL LHKHQESGCS GGPR 264

Abbreviation :
CLO : cleft lip only. CPO : cleft palate only. CLP : cleft lip and palate. CL/P : cleft lip with/without cleft palate.
For humans: CL/P, CLO, CPO, and CLP. For mice: CLO, CLP, and CPO.

Protein disorder information

Orthologous information

Show entries

Search:

Relation	Gene symbol	Entrez ID	UniProt ID	Cleft type	Developmental stage	Species	Evidence	Details
1:1 ortholog	Snai1	20613	Q02085	CPO	E13.5, E14.5, E15.5	Mus musculus	Publication	More>>
1:1 ortholog	SNAI1	504492	E1BMI0			Bos taurus	Prediction	More>>
1:1 ortholog	SNAI1	102172917	A0A452EKN0			Capra hircus	Prediction	More>>
1:1 ortholog	SNAI1	100071451	F6Z6C0			Equus caballus	Prediction	More>>
1:1 ortholog	SNAI1	6615	O95863			Homo sapiens	Prediction	More>>
1:1 ortholog	SNAI1	745644	K7BGT3			Pan troglodytes	Prediction	More>>
1:1 ortholog	SNAI1		A0A287B2D0			Sus scrofa	Prediction	More>>
1:1 ortholog	Snai1	116490	Q6AY35			Rattus norvegicus	Prediction	More>>

Showing 1 to 8 of 8 entries

Previous1Next

Gene ontology

Show entries

Search:

GO ID	GO Term
GO:0000122	negative regulation of transcription by RNA polymerase II
GO:0000977	RNA polymerase II regulatory region sequence-specific DNA binding
GO:0001227	DNA-binding transcription repressor activity, RNA polymerase II-specific
GO:0001649	osteoblast differentiation
GO:0001707	mesoderm formation
GO:0001837	epithelial to mesenchymal transition
GO:0003198	epithelial to mesenchymal transition involved in endocardial cushion formation
GO:0005634	nucleus
GO:0005654	nucleoplasm
GO:0005721	pericentric heterochromatin
GO:0005737	cytoplasm
GO:0005829	cytosol
GO:0006357	regulation of transcription by RNA polymerase II
GO:0007498	mesoderm development
GO:0010718	positive regulation of epithelial to mesenchymal transition
GO:0010957	negative regulation of vitamin D biosynthetic process
GO:0016477	cell migration
GO:0019900	kinase binding
GO:0030335	positive regulation of cell migration
GO:0031069	hair follicle morphogenesis