Gene: dlx1a

Basic information

Tag Content
Uniprot ID Q98875; Q567K7;
Entrez ID 30568
Genbank protein ID AAC60025.1; AAH93139.1;
Genbank nucleotide ID XM_005167400.3; NM_131305.1;
Ensembl protein ID ENSDARP00000011033
Ensembl nucleotide ID ENSDARG00000013125
Gene name Homeobox protein Dlx1a
Gene symbol dlx1a
Organism Danio rerio
NCBI taxa ID 7955
Cleft type
Developmental stage
Data sources Homology search
Reference
Functional description
Sequence
MTMSTIPESL NSPVSGKSVF MEFGPPSQQM SPSSMTHGHY SMHCLHSSGH PQHDSAYSPA 60
PSFPRSLPYP YVNSVGSHSS SPYLSTVQTY PNNSALAQTR LEDPAPESEK NTVVEGGEVR 120
FNGKGKKIRK PRTIYSSLQL QALNRRFQQT QYLALPERAE LAASLGLTQT QVKIWFQNKR 180
SKFKKLMKQG GGTIDTNALA NGRGLSTGSP SVAPVWNTTA TVKTSTPTSY IPSYTSWYPT 240
AHQDTMQQPQ LM 252

Abbreviation :
CLO : cleft lip only. CPO : cleft palate only. CLP : cleft lip and palate. CL/P : cleft lip with/without cleft palate.
For humans: CL/P, CLO, CPO, and CLP. For mice: CLO, CLP, and CPO.

Protein disorder information

Orthologous information

Relation Gene symbol Entrez ID UniProt ID Cleft type Developmental stage Species Evidence Details
1:1 orthologDLX1521806A6H733Bos taurusPredictionMore>>
1:1 orthologDLX1E2RFM6Canis lupus familiarisPredictionMore>>
1:1 orthologDLX1102187006A0A452EKR5Capra hircusPredictionMore>>
1:1 orthologDLX1100053103F6QWX6Equus caballusPredictionMore>>
1:1 orthologDLX11745P56177Homo sapiensPublicationMore>>
1:1 orthologDlx113390Q64317CPOMus musculusPublicationMore>>
1:1 orthologDLX1A0A2I3S2E5Pan troglodytesPredictionMore>>
1:1 ortholog100522648A0A4X1V5H4Sus scrofaPredictionMore>>
1:1 orthologDLX1100348143G1SK87Oryctolagus cuniculusPredictionMore>>
1:1 orthologDlx1296500G3V669Rattus norvegicusPredictionMore>>
1:1 orthologdlx1a30568Q98875Danio rerioPredictionMore>>

Gene ontology

GO ID GO Term
GO:0005634 nucleus
GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0051216 cartilage development
GO:0030154 cell differentiation
GO:0048703 embryonic viscerocranium morphogenesis
GO:0046533 negative regulation of photoreceptor cell differentiation
GO:0000122 negative regulation of transcription by RNA polymerase II
GO:1902871 positive regulation of amacrine cell differentiation
GO:0045597 positive regulation of cell differentiation
GO:0045944 positive regulation of transcription by RNA polymerase II
GO:0006357 regulation of transcription by RNA polymerase II

Functional annotations

Keywords

Keyword ID Keyword Term
KW-0217 Developmental protein
KW-0238 DNA-binding
KW-0371 Homeobox
KW-0539 Nucleus
KW-1185 Reference proteome

Interpro

InterPro ID InterPro Term
IPR009057 Homeobox-like_sf
IPR017970 Homeobox_CS
IPR001356 Homeobox_dom
IPR020479 Homeobox_metazoa
IPR000047 HTH_motif

PROSITE

PROSITE ID PROSITE Term
PS00027 HOMEOBOX_1
PS50071 HOMEOBOX_2

Pfam

Pfam ID Pfam Term
PF00046 Homeodomain