Gene: Bcl3

Basic information

Tag Content
Uniprot ID Q9Z2F6
Entrez ID 12051
Genbank protein ID AAC79694.1
Genbank nucleotide ID NM_033601.3
Ensembl protein ID ENSMUSP00000113851
Ensembl nucleotide ID ENSMUSG00000053175
Gene name B-cell lymphoma 3 protein homolog
Gene symbol Bcl3
Organism Mus musculus
NCBI taxa ID 10090
Cleft type
Developmental stage
Data sources Homology search
Reference
Functional description Contributes to the regulation of transcriptional activation of NF-kappa-B target genes. In the cytoplasm, inhibits the nuclear translocation of the NF-kappa-B p50 subunit (By similarity). In the nucleus, acts as transcriptional activator that promotes transcription of NF-kappa-B target genes. Contributes to the regulation of cell proliferation.
Sequence
MPRCPAGAMD EGPVDLRTRP KGTPGAALPL RKRPLRPASP EPATTRSPAG PLDALRSGCD 60
VPVVPGPPHC VARPEALYYQ GPLMPIYSTP TMAPHFPLLN LPTHPYSMIC PMEHPLSADI 120
AMATRVDEDG DTPLHIAVVQ NNIAAVYRIL SLFKLGSREV DVHNNLRQTP LHLAVITTLP 180
DMVRLLVTAG ASPMALDRHG QTAIHLACEH RSPSCLQALL DSATSGSVDL EVRNYEGLTA 240
LHVAVNTGCQ EAVLLLLERG ADIDAVDIKS GRSPLIHAVE NNSLNMVQLL LLHGANVNAQ 300
MYSGSSALHS ASGRGLLPLV RTLVRSGADS GLKNCHNDTP LMVARSRRVI DILRGKASRA 360
ASGSQPEPSP DQSATNSPES SSRLSSNGLQ SSPSSSPSLS PPKDAPGFPA TPQNFFLPTT 420
STPAFLPFPG VLRGPGRPVP PSPAPGSS 448

Abbreviation :
CLO : cleft lip only. CPO : cleft palate only. CLP : cleft lip and palate. CL/P : cleft lip with/without cleft palate.
For humans: CL/P, CLO, CPO, and CLP. For mice: CLO, CLP, and CPO.

Protein structural annotations

3D structure in PDB database

There is no related protein structure for this gene.

Protein disorder information

Orthologous information

Relation Gene symbol Entrez ID UniProt ID Cleft type Developmental stage Species Evidence Details
1:1 orthologBCL3531942E1BCE6Bos taurusPredictionMore>>
1:1 orthologBCL3102188215A0A452EUS0Capra hircusPredictionMore>>
1:1 orthologBCL3602P20749CL/PHomo sapiensPublicationMore>>
1:1 orthologBcl312051Q9Z2F6Mus musculusPredictionMore>>
1:1 orthologBCL3K7DP79Pan troglodytesPredictionMore>>
1:1 orthologBcl3D3ZQF8Rattus norvegicusPredictionMore>>

Identified variants/mutations related to cleft phenotype

Gene symbol Significant Variants/SNPS Methods PubMed ID
BCL3rs8100239T>AGenotyping20572854
BCL3rs8103315C>AGenotyping20572854

Other genetic variants/mutations

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Gene Ontology (GO)/biological pathways

GO:Molecular Function

GO ID GO Term Evidence
GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA bindingIDA
GO:0003700 DNA-binding transcription factor activityIDA
GO:0005515 protein bindingIPI
GO:0008134 transcription factor bindingISO

GO:Biological Process

GO ID GO Term Evidence
GO:0002268 follicular dendritic cell differentiationIMP
GO:0002315 marginal zone B cell differentiationIMP
GO:0002455 humoral immune response mediated by circulating immunoglobulinIMP
GO:0002467 germinal center formationIMP
GO:0006351 transcription, DNA-templatedISO
GO:0006974 cellular response to DNA damage stimulusISO
GO:0007249 I-kappaB kinase/NF-kappaB signalingISO
GO:0009615 response to virusISO
GO:0010225 response to UV-CISO
GO:0019730 antimicrobial humoral responseIMP
GO:0030198 extracellular matrix organizationIMP
GO:0030330 DNA damage response, signal transduction by p53 class mediatorISO
GO:0032729 positive regulation of interferon-gamma productionIMP
GO:0042088 T-helper 1 type immune responseIMP
GO:0042536 negative regulation of tumor necrosis factor biosynthetic processIMP
GO:0042742 defense response to bacteriumIMP
GO:0042771 intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediatorISO
GO:0042832 defense response to protozoanIMP
GO:0042981 regulation of apoptotic processISO
GO:0043066 negative regulation of apoptotic processISO
GO:0043066 negative regulation of apoptotic processIGI
GO:0043066 negative regulation of apoptotic processIMP
GO:0045064 T-helper 2 cell differentiationIMP
GO:0045082 positive regulation of interleukin-10 biosynthetic processIMP
GO:0045415 negative regulation of interleukin-8 biosynthetic processISO
GO:0045727 positive regulation of translationISO
GO:0045892 negative regulation of transcription, DNA-templatedISO
GO:0045893 positive regulation of transcription, DNA-templatedISO
GO:0045944 positive regulation of transcription by RNA polymerase IIIDA
GO:0046426 negative regulation of receptor signaling pathway via JAK-STATISO
GO:0048536 spleen developmentIMP
GO:0051101 regulation of DNA bindingIEA
GO:1901222 regulation of NIK/NF-kappaB signalingIEA

GO:Cellular Component

GO ID GO Term Evidence
GO:0005634 nucleusISO
GO:0005654 nucleoplasmISO
GO:0005737 cytoplasmISO
GO:0005829 cytosolISO
GO:0005886 plasma membraneISO
GO:0030496 midbodyISO
GO:0032991 protein-containing complexISO
GO:0032996 Bcl3-Bcl10 complexISO
GO:0033257 Bcl3/NF-kappaB2 complexISO
GO:0043231 intracellular membrane-bounded organelleISO
GO:0048471 perinuclear region of cytoplasmIEA

Reactome Pathway

Reactome ID Reactome Term Evidence

Functional annotations

Keywords

Keyword ID Keyword Term
KW-0010 Activator
KW-0040 ANK repeat
KW-0963 Cytoplasm
KW-0539 Nucleus
KW-0597 Phosphoprotein
KW-1185 Reference proteome
KW-0677 Repeat
KW-0804 Transcription
KW-0805 Transcription regulation
KW-0832 Ubl conjugation

Interpro

InterPro ID InterPro Term
IPR002110 Ankyrin_rpt
IPR020683 Ankyrin_rpt-contain_dom
IPR036770 Ankyrin_rpt-contain_sf

PROSITE

PROSITE ID PROSITE Term
PS50297 ANK_REP_REGION
PS50088 ANK_REPEAT

Pfam

Pfam ID Pfam Term
PF00023 Ank
PF12796 Ank_2

Protein-protein interaction

Protein-miRNA interaction