| Tag | Content |
|---|---|
| Uniprot ID | T2DKU4 |
| Entrez ID | 30680 |
| Genbank protein ID | AGV53011.1 |
| Genbank nucleotide ID | XM_005156052.3 |
| Ensembl protein ID | ENSDARP00000139532 |
| Ensembl nucleotide ID | ENSDARG00000056783 |
| Gene name | Retinoic acid receptor alpha a 201 |
| Gene symbol | raraa |
| Organism | Danio rerio |
| NCBI taxa ID | 7955 |
| Cleft type | |
| Developmental stage | |
| Data sources | Homology search |
| Reference | |
| Functional description | |
| Sequence | MSGKGNPSPH LNGFPMAHFS YFFPHMLGGL SPPSLPTLPL SGYSTPSPAT IETQSTSSEE 60 IVPSPPSPPP PPRIYKPCFV CQDKSSGYHY GVSACEGCKG FFRRSIQKNM VYTCHREKNC 120 IINKVTRNRC QYCRLQKCLE VGMSKESVRN DRNKKKKEEK KPECTENYTL SPDTEQMIDR 180 VRKAHQETFP SLCQLGKYTT SNSSERRVAL DVDLWDKFSE LSTKCIIKTV EFAKQLPGFT 240 TLTIADQITL LKAACLDILI LRICTRYTPE QDTMTFSDGL TLNRTQMHNA GFGPLTDLVF 300 AFANQLLPLE MDDAETGLLS AICLLCGDRQ DLEQADKVDV LQEPLLEALK IYVRNRRPHK 360 PHMFPKMLMK ITDLRSISAK GAERVITLKM EIPGSMPPLI QEMLENSEGL ESSSGAQGSR 420 ASATTPGSCS PSLSPNSAQS SPPTQSP 447 |
Abbreviation :
CLO : cleft lip only. CPO : cleft palate only.
CLP : cleft lip and palate. CL/P : cleft lip with/without cleft palate.
For humans: CL/P, CLO, CPO, and CLP. For mice: CLO, CLP, and CPO.
| Relation | Gene symbol | Entrez ID | UniProt ID | Cleft type | Developmental stage | Species | Evidence | Details |
|---|---|---|---|---|---|---|---|---|
| 1:1 ortholog | RARA | 534280 | F1MWQ3 | Bos taurus | Prediction | More>> | ||
| 1:1 ortholog | RARA | 102188350 | A0A452EMU9 | Capra hircus | Prediction | More>> | ||
| 1:1 ortholog | RARA | 5914 | P10276 | CPO,CL/P | Homo sapiens | Publication | More>> | |
| 1:1 ortholog | Rara | 19401 | P11416 | CPO | E14.5 | Mus musculus | Publication | More>> |
| 1:1 ortholog | RARA | 454647 | A0A2J8KGL7 | Pan troglodytes | Prediction | More>> | ||
| 1:1 ortholog | RARA | 396709 | A0A480PNE7 | Sus scrofa | Prediction | More>> | ||
| 1:1 ortholog | RARA | G1TI43 | Oryctolagus cuniculus | Prediction | More>> | |||
| 1:1 ortholog | Rara | 24705 | A0A0G2JW78 | Rattus norvegicus | Prediction | More>> | ||
| 1:1 ortholog | raraa | 30680 | T2DKU4 | Danio rerio | Prediction | More>> |
| GO ID | GO Term |
|---|---|
| GO:0005634 | nucleus |
| GO:0004879 | nuclear receptor activity |
| GO:0043565 | sequence-specific DNA binding |
| GO:0008270 | zinc ion binding |
| GO:0048384 | retinoic acid receptor signaling pathway |