Gene Page: ZNF423

Summary
GeneID  23090
Symbol  ZNF423
Synonyms  Ebfaz|KIAA0760|MGC138520|MGC138522|OAZ|Roaz|ZFP423|Zfp104
Description  zinc finger protein 423
See related  HGNC:16762|MIM:604557|Ensembl:ENSG00000102935|HPRD:05189|
Locus tag  -
Gene type  protein-coding
Map location  16q12
 
Gene in Data Sources
Gene set name Method of gene set Evidence Info
GSMA_IIEgenome scan meta-analysis (European-ancestry samples)Psr: 0.01775 
GO_AnnotationMapping neuro-related keywords to Gene Ontology annotationsHits with neuro-related keywords: 1 
 
General Gene Expression (microarray) ?
 
Gene Expression in Brain Regions (new)
 
Top co-expressed genes in Brain Regions (new)
GenePearson's Correlation Spearman's Correlation
Top 10 positively co-expressed genes
UBR30.950.96
DMXL20.940.94
TMEM30A0.940.94
ATP6V1A0.930.94
CLTC0.930.93
PJA20.930.94
DNAJC60.930.92
BAG40.920.94
COL4A3BP0.920.93
AC010896.10.920.94
Top 10 negatively co-expressed genes
RAB34-0.56-0.64
C1orf61-0.55-0.72
DBI-0.53-0.62
C1orf54-0.53-0.61
HIGD1B-0.52-0.56
AP002478.3-0.52-0.59
FXYD1-0.51-0.54
EFEMP2-0.51-0.55
SAT1-0.51-0.59
PLA2G5-0.51-0.53
Gene Ontology
Molecular functionGO termEvidenceNeuro keywordsPubMed ID
GO:0003677DNA bindingIEA-
GO:0008270zinc ion bindingIEA-
GO:0016564transcription repressor activityIDA10660046 
GO:0016563transcription activator activityIDA10660046 
GO:0046872metal ion bindingIEA-
Biological processGO termEvidenceNeuro keywordsPubMed ID
GO:0007399nervous system developmentIEAneurite (GO term level: 5)-
GO:0006355regulation of transcription, DNA-dependentIEA-
GO:0007275multicellular organismal developmentIEA-
GO:0016481negative regulation of transcriptionIDA10660046 
GO:0030154cell differentiationIEA-
GO:0045941positive regulation of transcriptionIDA10660046 
Cellular componentGO termEvidenceNeuro keywordsPubMed ID
GO:0005622intracellularIEA-
GO:0005634nucleusIDA10660046 
 
InteractionsShown by Network
InteractorsAliases BOfficial full name BExperimentalSourcePubMed ID
EBF1COE1 | EBF | FLJ39389 | FLJ41763 | O/E-1 | OLF1early B-cell factor 1-HPRD,BioGRID9151733 
EBF2COE2 | EBF-2 | FLJ11500 | O/E-3 | OE-3early B-cell factor 2Co-purificationBioGRID9151733 
EBF3COE3 | O/E-2early B-cell factor 3Co-purificationBioGRID9151733 
PARP1ADPRT | ADPRT1 | PARP | PARP-1 | PPOL | pADPRT-1poly (ADP-ribose) polymerase 1-HPRD,BioGRID14623329 
SMAD1BSP1 | JV4-1 | JV41 | MADH1 | MADR1SMAD family member 1-HPRD,BioGRID10660046 
SMAD4DPC4 | JIP | MADH4SMAD family member 4-HPRD,BioGRID10660046 
 
Pathway annotation
Pathway namePathway size# SZGR genes in pathwayInfo
ONKEN_UVEAL_MELANOMA_DN 526357All SZGR genes in this pathway
VECCHI_GASTRIC_CANCER_ADVANCED_VS_EARLY_UP 175120All SZGR genes in this pathway
KINSEY_TARGETS_OF_EWSR1_FLII_FUSION_DN 329219All SZGR genes in this pathway
ASTON_MAJOR_DEPRESSIVE_DISORDER_UP 4936All SZGR genes in this pathway
LI_WILMS_TUMOR_VS_FETAL_KIDNEY_1_DN 163115All SZGR genes in this pathway
HADDAD_B_LYMPHOCYTE_PROGENITOR 293193All SZGR genes in this pathway
LU_AGING_BRAIN_UP 262186All SZGR genes in this pathway
MCLACHLAN_DENTAL_CARIES_DN 245144All SZGR genes in this pathway
MOLENAAR_TARGETS_OF_CCND1_AND_CDK4_UP 6748All SZGR genes in this pathway
BUCKANOVICH_T_LYMPHOCYTE_HOMING_ON_TUMOR_DN 2416All SZGR genes in this pathway
BONCI_TARGETS_OF_MIR15A_AND_MIR16_1 9175All SZGR genes in this pathway
CAIRO_LIVER_DEVELOPMENT_UP 166105All SZGR genes in this pathway
HOELZEL_NF1_TARGETS_DN 11573All SZGR genes in this pathway
PANGAS_TUMOR_SUPPRESSION_BY_SMAD1_AND_SMAD5_UP 13485All SZGR genes in this pathway
BILANGES_SERUM_SENSITIVE_GENES 9054All SZGR genes in this pathway
WAKABAYASHI_ADIPOGENESIS_PPARG_BOUND_8D 658397All SZGR genes in this pathway
LIM_MAMMARY_STEM_CELL_UP 489314All SZGR genes in this pathway
miRNA Targets ?
miRNA familyTarget positionmiRNA IDmiRNA seq
UTR startUTR endMatch method
miR-145588594m8hsa-miR-145GUCCAGUUUUCCCAGGAAUCCCUU
miR-15/16/195/424/4971351411Ahsa-miR-15abrainUAGCAGCACAUAAUGGUUUGUG
hsa-miR-16brainUAGCAGCACGUAAAUAUUGGCG
hsa-miR-15bbrainUAGCAGCACAUCAUGGUUUACA
hsa-miR-195SZUAGCAGCACAGAAAUAUUGGC
hsa-miR-424CAGCAGCAAUUCAUGUUUUGAA
hsa-miR-497CAGCAGCACACUGUGGUUUGU
miR-203.1254260m8hsa-miR-203UGAAAUGUUUAGGACCACUAG
miR-204/2116496561A,m8hsa-miR-204brainUUCCCUUUGUCAUCCUAUGCCU
hsa-miR-211UUCCCUUUGUCAUCCUUCGCCU
miR-2161741801Ahsa-miR-216UAAUCUCAGCUGGCAACUGUG
miR-2246116181A,m8hsa-miR-224CAAGUCACUAGUGGUUCCGUUUA
miR-23608614m8hsa-miR-23abrainAUCACAUUGCCAGGGAUUUCC
hsa-miR-23bbrainAUCACAUUGCCAGGGAUUACC
miR-3236086141Ahsa-miR-323brainGCACAUUACACGGUCGACCUCU
miR-3285662m8hsa-miR-328brainCUGGCCCUCUCUGCCCUUCCGU
miR-3305165231A,m8hsa-miR-330brainGCAAAGCACACGGCCUGCAGAGA
miR-369-3p3113181A,m8hsa-miR-369-3pAAUAAUACAUGGUUGAUCUUU
hsa-miR-369-3pAAUAAUACAUGGUUGAUCUUU
miR-3741401471A,m8hsa-miR-374UUAUAAUACAACCUGAUAAGUG
hsa-miR-374UUAUAAUACAACCUGAUAAGUG
miR-421128134m8hsa-miR-421GGCCUCAUUAAAUGUUUGUUG
miR-4961041101Ahsa-miR-496AUUACAUGGCCAAUCUC
miR-5031341411A,m8hsa-miR-503UAGCAGCGGGAACAGUUCUGCAG
  • SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
  • Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.


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