Gene Page

Interactors	Aliases B	Official full name B	Experimental	Source	PubMed ID
ASCC1	ASC1p50 \| CGI-18 \| RP11-150D20.4	activating signal cointegrator 1 complex subunit 1	Reconstituted Complex Two-hybrid	BioGRID	12077347
ASCC2	ASC1p100	activating signal cointegrator 1 complex subunit 2	Reconstituted Complex Two-hybrid	BioGRID	12077347
ASCC3	ASC1p200 \| DJ467N11.1 \| HELIC1 \| MGC26074 \| RNAH \| dJ121G13.4	activating signal cointegrator 1 complex subunit 3	Reconstituted Complex Two-hybrid	BioGRID	12077347
ATF6	ATF6A	activating transcription factor 6	-	HPRD,BioGRID	9271374
BARX2	MGC133368 \| MGC133369	BARX homeobox 2	-	HPRD	11278942
CD63	LAMP-3 \| ME491 \| MLA1 \| OMA81H \| TSPAN30	CD63 molecule	Two-hybrid	BioGRID	9271374
CEBPB	C/EBP-beta \| CRP2 \| IL6DBP \| LAP \| MGC32080 \| NF-IL6 \| TCF5	CCAAT/enhancer binding protein (C/EBP), beta	-	HPRD	11500490
CEBPB	C/EBP-beta \| CRP2 \| IL6DBP \| LAP \| MGC32080 \| NF-IL6 \| TCF5	CCAAT/enhancer binding protein (C/EBP), beta	Affinity Capture-Western Reconstituted Complex Two-hybrid	BioGRID	9032301 \|10318842
CREBBP	CBP \| KAT3A \| RSTS	CREB binding protein	Affinity Capture-Western	BioGRID	12622724
CRIP2	CRIP \| CRP2 \| ESP1	cysteine-rich protein 2	-	HPRD	12530967
ELK1	-	ELK1, member of ETS oncogene family	-	HPRD,BioGRID	9010223
ELK4	SAP1	ELK4, ETS-domain protein (SRF accessory protein 1)	-	HPRD	11406578 \|11846562
ELK4	SAP1	ELK4, ETS-domain protein (SRF accessory protein 1)	-	HPRD,BioGRID	11406578
FHL1	FHL1B \| FLH1A \| KYO-T \| MGC111107 \| SLIM1 \| XMPMA \| bA535K18.1	four and a half LIM domains 1	SRF interacts with FHL1. This interaction was modeled on a demonstrated interaction between human SRF and FHL1 from an unspecified species.	BIND	15610731
FHL2	AAG11 \| DRAL \| SLIM3	four and a half LIM domains 2	SRF interacts with FHL2.	BIND	15610731
FHL3	MGC19547 \| MGC23614 \| MGC8696 \| SLIM2	four and a half LIM domains 3	SRF interacts with FHL3. This interaction was modeled on a demonstrated interaction between human SRF and FHL3 from an unspecified species.	BIND	15610731
FHL5	ACT \| FLJ33049 \| KIAA0776 \| RP3-393D12.2 \| dJ393D12.2	four and a half LIM domains 5	SRF interacts with ACT. This interaction was modeled on a demonstrated interaction between human SRF and ACT from an unspecified species.	BIND	15610731
FLI1	EWSR2 \| SIC-1	Friend leukemia virus integration 1	-	HPRD,BioGRID	9010223 \|10606656
FOS	AP-1 \| C-FOS	v-fos FBJ murine osteosarcoma viral oncogene homolog	SRF interacts with the c-fos promoter CArG box. This interaction was modeled on a demonstrated interaction between human SRF and c-fos promoter CArG box from an unspecified species.	BIND	15610731
FOSL1	FRA \| FRA1 \| fra-1	FOS-like antigen 1	SRF interacts with the region of the FRA-1 promoter containing the SRE and ATF sites.	BIND	15806162
GATA4	MGC126629	GATA binding protein 4	-	HPRD,BioGRID	11158291
GTF2F1	BTF4 \| RAP74 \| TF2F1 \| TFIIF	general transcription factor IIF, polypeptide 1, 74kDa	-	HPRD,BioGRID	7854423 \|8106390
GTF2I	BAP-135 \| BAP135 \| BTKAP1 \| DIWS \| FLJ38776 \| FLJ56355 \| IB291 \| SPIN \| TFII-I \| WBS \| WBSCR6	general transcription factor II, i	-	HPRD,BioGRID	9334314
HOPX	Cameo \| HOP \| LAGY \| MGC20820 \| NECC1 \| OB1 \| SMAP31 \| Toto	HOP homeobox	-	HPRD	12297045
MKL1	BSAC \| MAL \| MRTF-A	megakaryoblastic leukemia (translocation) 1	-	HPRD,BioGRID	12397177\|14565952
MKL1	BSAC \| MAL \| MRTF-A	megakaryoblastic leukemia (translocation) 1	-	HPRD	14565952
MKL2	DKFZp686J1745 \| FLJ31823 \| FLJ45623 \| MRTF-B \| NPD001	MKL/myocardin-like 2	-	HPRD,BioGRID	12397177 \|14565952
MYOCD	MYCD	myocardin	-	HPRD,BioGRID	11439182 \|12397177 \|15014501
MYOD1	MYF3 \| MYOD \| PUM \| bHLHc1	myogenic differentiation 1	-	HPRD	8617811
MYOG	MYF4 \| MYOGENIN \| bHLHc3	myogenin (myogenic factor 4)	-	HPRD,BioGRID	8617811
NCOA1	F-SRC-1 \| KAT13A \| MGC129719 \| MGC129720 \| NCoA-1 \| RIP160 \| SRC-1 \| SRC1 \| bHLHe42	nuclear receptor coactivator 1	-	HPRD	9786846
NCOA6	AIB3 \| ANTP \| ASC2 \| HOX1.1 \| HOXA7 \| KIAA0181 \| NRC \| PRIP \| RAP250 \| TRBP	nuclear receptor coactivator 6	Reconstituted Complex	BioGRID	10847592
NCOR2	CTG26 \| SMRT \| SMRTE \| SMRTE-tau \| TNRC14 \| TRAC-1 \| TRAC1	nuclear receptor co-repressor 2	-	HPRD,BioGRID	10777532
NFYA	CBF-A \| CBF-B \| FLJ11236 \| HAP2 \| NF-YA	nuclear transcription factor Y, alpha	NF-YA interacts with SRF. This interaction was modeled on a demonstrated interaction between NF-YA from an unspecified species and SRF from human.	BIND	10571058
NFYA	CBF-A \| CBF-B \| FLJ11236 \| HAP2 \| NF-YA	nuclear transcription factor Y, alpha	Reconstituted Complex Two-hybrid	BioGRID	10571058
NKX2-3	CSX3 \| NK2.3 \| NKX2.3 \| NKX2C \| NKX4-3	NK2 transcription factor related, locus 3 (Drosophila)	-	HPRD	11457859
NKX2-5	CHNG5 \| CSX \| CSX1 \| NKX2.5 \| NKX2E \| NKX4-1	NK2 transcription factor related, locus 5 (Drosophila)	-	HPRD	8887666
NKX3-1	BAPX2 \| NKX3 \| NKX3.1 \| NKX3A	NK3 homeobox 1	-	HPRD,BioGRID	10993896
PML	MYL \| PP8675 \| RNF71 \| TRIM19	promyelocytic leukemia	-	HPRD,BioGRID	12622724
PRRX1	PHOX1 \| PMX1 \| PRX1	paired related homeobox 1	-	HPRD	9334314
PYCARD	ASC \| CARD5 \| MGC10332 \| TMS \| TMS-1 \| TMS1	PYD and CARD domain containing	-	HPRD	10847592
RARG	NR1B3 \| RARC	retinoic acid receptor, gamma	Reconstituted Complex	BioGRID	11641790
REL	C-Rel	v-rel reticuloendotheliosis viral oncogene homolog (avian)	Reconstituted Complex	BioGRID	8670842
RELA	MGC131774 \| NFKB3 \| p65	v-rel reticuloendotheliosis viral oncogene homolog A (avian)	Reconstituted Complex	BioGRID	8670842
RXRA	FLJ00280 \| FLJ00318 \| FLJ16020 \| FLJ16733 \| MGC102720 \| NR2B1	retinoid X receptor, alpha	-	HPRD	11641790
RXRG	NR2B3 \| RXRC	retinoid X receptor, gamma	-	HPRD,BioGRID	11641790
SP1	-	Sp1 transcription factor	Reconstituted Complex	BioGRID	10082523
SRC	ASV \| SRC1 \| c-SRC \| p60-Src	v-src sarcoma (Schmidt-Ruppin A-2) viral oncogene homolog (avian)	-	HPRD,BioGRID	9786846
SRF	MCM1	serum response factor (c-fos serum response element-binding transcription factor)	-	HPRD	11406578
SSRP1	FACT \| FACT80 \| T160	structure specific recognition protein 1	-	HPRD,BioGRID	10336466
TEAD1	AA \| REF1 \| TCF13 \| TEF-1	TEA domain family member 1 (SV40 transcriptional enhancer factor)	-	HPRD,BioGRID	11136726 \|12061776

Pathway annotation

Pathway name	Pathway size	# SZGR genes in pathway	Info
KEGG_MAPK_SIGNALING_PATHWAY	267	205	All SZGR genes in this pathway
BIOCARTA_EGF_PATHWAY	31	25	All SZGR genes in this pathway
BIOCARTA_GH_PATHWAY	28	22	All SZGR genes in this pathway
BIOCARTA_IGF1_PATHWAY	21	16	All SZGR genes in this pathway
BIOCARTA_IL6_PATHWAY	22	16	All SZGR genes in this pathway
BIOCARTA_INSULIN_PATHWAY	22	16	All SZGR genes in this pathway
BIOCARTA_PDGF_PATHWAY	32	25	All SZGR genes in this pathway
BIOCARTA_MAL_PATHWAY	19	17	All SZGR genes in this pathway
ST_P38_MAPK_PATHWAY	37	28	All SZGR genes in this pathway
ST_GA13_PATHWAY	37	32	All SZGR genes in this pathway
PID_RHOA_PATHWAY	45	33	All SZGR genes in this pathway
PID_HDAC_CLASSII_PATHWAY	34	27	All SZGR genes in this pathway
PID_AR_PATHWAY	61	46	All SZGR genes in this pathway
PID_ERBB1_DOWNSTREAM_PATHWAY	105	78	All SZGR genes in this pathway
PID_PDGFRB_PATHWAY	129	103	All SZGR genes in this pathway
PID_P38_MK2_PATHWAY	21	19	All SZGR genes in this pathway
PID_PDGFRA_PATHWAY	22	18	All SZGR genes in this pathway
PID_MAPK_TRK_PATHWAY	34	31	All SZGR genes in this pathway
LIU_SOX4_TARGETS_DN	309	191	All SZGR genes in this pathway
MULLIGHAN_MLL_SIGNATURE_1_UP	380	236	All SZGR genes in this pathway
NAGASHIMA_NRG1_SIGNALING_UP	176	123	All SZGR genes in this pathway
KIM_WT1_TARGETS_UP	214	155	All SZGR genes in this pathway
ENK_UV_RESPONSE_KERATINOCYTE_DN	485	334	All SZGR genes in this pathway
YEMELYANOV_GR_TARGETS_DN	10	8	All SZGR genes in this pathway
GRAESSMANN_APOPTOSIS_BY_DOXORUBICIN_UP	1142	669	All SZGR genes in this pathway
GRAESSMANN_RESPONSE_TO_MC_AND_DOXORUBICIN_UP	612	367	All SZGR genes in this pathway
DARWICHE_SKIN_TUMOR_PROMOTER_DN	185	115	All SZGR genes in this pathway
DARWICHE_PAPILLOMA_RISK_LOW_DN	165	107	All SZGR genes in this pathway
DARWICHE_PAPILLOMA_RISK_HIGH_DN	180	110	All SZGR genes in this pathway
DARWICHE_SQUAMOUS_CELL_CARCINOMA_DN	181	107	All SZGR genes in this pathway
MARTIN_INTERACT_WITH_HDAC	44	31	All SZGR genes in this pathway
SPIELMAN_LYMPHOBLAST_EUROPEAN_VS_ASIAN_UP	479	299	All SZGR genes in this pathway
NUYTTEN_EZH2_TARGETS_DN	1024	594	All SZGR genes in this pathway
BUYTAERT_PHOTODYNAMIC_THERAPY_STRESS_DN	637	377	All SZGR genes in this pathway
BENPORATH_CYCLING_GENES	648	385	All SZGR genes in this pathway
BENPORATH_ES_CORE_NINE_CORRELATED	100	68	All SZGR genes in this pathway
COLLIS_PRKDC_SUBSTRATES	20	15	All SZGR genes in this pathway
MAGRANGEAS_MULTIPLE_MYELOMA_IGG_VS_IGA_UP	22	12	All SZGR genes in this pathway
FLECHNER_PBL_KIDNEY_TRANSPLANT_REJECTED_VS_OK_UP	63	48	All SZGR genes in this pathway
IVANOVA_HEMATOPOIESIS_EARLY_PROGENITOR	532	309	All SZGR genes in this pathway
WEIGEL_OXIDATIVE_STRESS_BY_TBH_AND_H2O2	36	24	All SZGR genes in this pathway
GENTILE_UV_RESPONSE_CLUSTER_D5	39	26	All SZGR genes in this pathway
ZHU_CMV_ALL_UP	120	89	All SZGR genes in this pathway
GENTILE_UV_HIGH_DOSE_DN	312	203	All SZGR genes in this pathway
ZHU_CMV_24_HR_UP	93	65	All SZGR genes in this pathway
DOUGLAS_BMI1_TARGETS_UP	566	371	All SZGR genes in this pathway
OUYANG_PROSTATE_CANCER_PROGRESSION_DN	21	16	All SZGR genes in this pathway
ACEVEDO_NORMAL_TISSUE_ADJACENT_TO_LIVER_TUMOR_DN	354	216	All SZGR genes in this pathway
ACEVEDO_LIVER_CANCER_DN	540	340	All SZGR genes in this pathway
ACEVEDO_METHYLATED_IN_LIVER_CANCER_DN	940	425	All SZGR genes in this pathway
QI_PLASMACYTOMA_UP	259	185	All SZGR genes in this pathway
PARK_APL_PATHOGENESIS_DN	50	35	All SZGR genes in this pathway
HOFFMANN_LARGE_TO_SMALL_PRE_BII_LYMPHOCYTE_DN	72	47	All SZGR genes in this pathway
SHEDDEN_LUNG_CANCER_GOOD_SURVIVAL_A12	317	177	All SZGR genes in this pathway
WHITFIELD_CELL_CYCLE_G2_M	216	124	All SZGR genes in this pathway
ZWANG_CLASS_1_TRANSIENTLY_INDUCED_BY_EGF	516	308	All SZGR genes in this pathway

miRNA Targets ?

miRNA family	Target position			miRNA ID	miRNA seq
miRNA family	UTR start	UTR end	Match method	miRNA ID	miRNA seq
miR-101	1315	1321	1A	hsa-miR-101	UACAGUACUGUGAUAACUGAAG
miR-122	145	151	1A	hsa-miR-122a	UGGAGUGUGACAAUGGUGUUUGU
miR-125/351	470	476	m8	hsa-miR-125b^brain	UCCCUGAGACCCUAACUUGUGA
miR-125/351	470	476	m8	hsa-miR-125a^brain	UCCCUGAGACCCUUUAACCUGUG
miR-142-5p	1360	1366	m8	hsa-miR-142-5p	CAUAAAGUAGAAAGCACUAC
miR-144	1315	1321	1A	hsa-miR-144	UACAGUAUAGAUGAUGUACUAG
miR-150	2036	2042	m8	hsa-miR-150	UCUCCCAACCCUUGUACCAGUG
miR-186	69	75	1A	hsa-miR-186	CAAAGAAUUCUCCUUUUGGGCUU
miR-200bc/429	1384	1390	m8	hsa-miR-200b	UAAUACUGCCUGGUAAUGAUGAC
				hsa-miR-200c	UAAUACUGCCGGGUAAUGAUGG
				hsa-miR-429	UAAUACUGUCUGGUAAAACCGU
				hsa-miR-200b	UAAUACUGCCUGGUAAUGAUGAC
				hsa-miR-200c	UAAUACUGCCGGGUAAUGAUGG
				hsa-miR-429	UAAUACUGUCUGGUAAAACCGU
miR-22	1310	1316	1A	hsa-miR-22^brain	AAGCUGCCAGUUGAAGAACUGU
miR-28	531	537	m8	hsa-miR-28^brain	AAGGAGCUCACAGUCUAUUGAG
miR-377	2021	2027	m8	hsa-miR-377	AUCACACAAAGGCAACUUUUGU
miR-485-5p	398	404	m8	hsa-miR-485-5p	AGAGGCUGGCCGUGAUGAAUUC
miR-486	1401	1407	m8	hsa-miR-486	UCCUGUACUGAGCUGCCCCGAG
miR-7	659	665	m8	hsa-miR-7^SZ	UGGAAGACUAGUGAUUUUGUUG
miR-9	153	159	1A	hsa-miR-9^SZ	UCUUUGGUUAUCUAGCUGUAUGA

SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.