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GeneID |
774
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Symbol |
CACNA1B
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Synonyms |
BIII|CACNL1A5|CACNN|Cav2.2
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Description |
calcium channel, voltage-dependent, N type, alpha 1B subunit |
See related |
HGNC:1389|MIM:601012|HPRD:03005| |
Locus tag |
- |
Gene type |
protein-coding |
Map location |
9q34 |
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Gene set name |
Method of gene set |
Evidence |
Info |
Literature | High-throughput literature-search | Co-occurance with Schizophrenia keywords: [schizophrenias, schizophrenia] | Click to show detail | GO_Annotation | Mapping neuro-related keywords to Gene Ontology annotations | Hits with neuro-related keywords: 1 | |
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General Gene Expression (microarray) ? |
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Gene Expression in Brain Regions (new) |
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Top co-expressed genes in Brain Regions (new) |
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Gene | Pearson's Correlation | Spearman's Correlation | | |
Top 10 positively co-expressed genes |
ITPKA | 0.87 | 0.86 | | |
CA11 | 0.83 | 0.88 | | |
TMEM38A | 0.83 | 0.85 | | |
ACOT4 | 0.82 | 0.84 | | |
RUNDC3A | 0.82 | 0.73 | | |
ENSA | 0.82 | 0.69 | | |
TUBA1 | 0.81 | 0.87 | | |
ST6GALNAC6 | 0.81 | 0.81 | | |
ADAP1 | 0.81 | 0.76 | | |
CAMK2N1 | 0.81 | 0.73 | | |
Top 10 negatively co-expressed genes | KIAA1949 | -0.63 | -0.66 | | |
TUBB2B | -0.63 | -0.71 | | |
FADS2 | -0.61 | -0.67 | | |
SH3BP2 | -0.61 | -0.72 | | |
ZNF311 | -0.60 | -0.61 | | |
KCTD11 | -0.60 | -0.70 | | |
JUP | -0.59 | -0.63 | | |
COTL1 | -0.59 | -0.62 | | |
ZNF193 | -0.59 | -0.63 | | |
TIGD1 | -0.59 | -0.63 | | |
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Molecular function | GO term | Evidence | Neuro keywords | PubMed ID |
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GO:0000166 | nucleotide binding | IEA | | - |
GO:0005509 | calcium ion binding | IEA | | - |
GO:0005524 | ATP binding | IEA | | - |
GO:0005244 | voltage-gated ion channel activity | IEA | | - |
GO:0005245 | voltage-gated calcium channel activity | IEA | | - |
GO:0005245 | voltage-gated calcium channel activity | TAS | | 1321501 |
GO:0008022 | protein C-terminus binding | IPI | | 15728831 |
Biological process | GO term | Evidence | Neuro keywords | PubMed ID |
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GO:0007268 | synaptic transmission | TAS | neuron, Synap, Neurotransmitter (GO term level: 6) | 9030575 |
GO:0006816 | calcium ion transport | IEA | | - |
GO:0006811 | ion transport | IEA | | - |
Cellular component | GO term | Evidence | Neuro keywords | PubMed ID |
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GO:0016021 | integral to membrane | IEA | | - |
GO:0005886 | plasma membrane | EXP | | 8825650 |
GO:0005891 | voltage-gated calcium channel complex | TAS | | 1321501 |
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