Gene Page: TTLL7

Summary
GeneID  79739
Symbol  TTLL7
Synonyms  FLJ23033|FLJ36855|RP5-836J3.2
Description  tubulin tyrosine ligase-like family, member 7
See related  HGNC:26242|Ensembl:ENSG00000137941|HPRD:08013|
Locus tag  -
Gene type  protein-coding
Map location  1p31.1
 
Gene in Data Sources
Gene set name Method of gene set Evidence Info
GSMA_IIAgenome scan meta-analysis (All samples)Psr: 0.02692 
ExpressionExpressionP value: 1.656 
GO_AnnotationMapping neuro-related keywords to Gene Ontology annotationsHits with neuro-related keywords: 1 
 
General Gene Expression (microarray) ?
 
Gene Expression in Brain Regions (new)
 
Top co-expressed genes in Brain Regions (new)
GenePearson's Correlation Spearman's Correlation
Top 10 positively co-expressed genes
GPS10.920.92
MRPS20.900.92
MAP2K20.890.90
LYPLA20.880.88
TBRG40.880.85
PPP2R1A0.880.88
GNB1L0.880.86
THAP80.870.87
NOC4L0.870.88
RUVBL20.870.87
Top 10 negatively co-expressed genes
AF347015.8-0.67-0.73
AF347015.33-0.66-0.72
AF347015.27-0.66-0.72
MT-CO2-0.65-0.69
AF347015.31-0.65-0.69
MT-CYB-0.65-0.71
AF347015.15-0.63-0.69
AF347015.2-0.62-0.69
AF347015.21-0.62-0.71
AF347015.26-0.61-0.69
Gene Ontology
Molecular functionGO termEvidenceNeuro keywordsPubMed ID
GO:0004835tubulin-tyrosine ligase activityIEA-
GO:0016874ligase activityIEA-
Biological processGO termEvidenceNeuro keywordsPubMed ID
GO:0007399nervous system developmentIEAneurite (GO term level: 5)-
GO:0006464protein modification processIEA-
GO:0007275multicellular organismal developmentIEA-
GO:0030154cell differentiationIEA-
Cellular componentGO termEvidenceNeuro keywordsPubMed ID
GO:0005929ciliumIEA-
GO:0043204perikaryonIEA-
 
Pathway annotation
Pathway namePathway size# SZGR genes in pathwayInfo
ZHONG_RESPONSE_TO_AZACITIDINE_AND_TSA_UP 183119All SZGR genes in this pathway
VECCHI_GASTRIC_CANCER_EARLY_DN 367220All SZGR genes in this pathway
CHEBOTAEV_GR_TARGETS_UP 7762All SZGR genes in this pathway
GAUSSMANN_MLL_AF4_FUSION_TARGETS_F_UP 185119All SZGR genes in this pathway
LASTOWSKA_NEUROBLASTOMA_COPY_NUMBER_DN 800473All SZGR genes in this pathway
LIAO_METASTASIS 539324All SZGR genes in this pathway
BENPORATH_ES_WITH_H3K27ME3 1118744All SZGR genes in this pathway
STARK_PREFRONTAL_CORTEX_22Q11_DELETION_DN 517309All SZGR genes in this pathway
IVANOVA_HEMATOPOIESIS_STEM_CELL_LONG_TERM 302191All SZGR genes in this pathway
CUI_TCF21_TARGETS_2_DN 830547All SZGR genes in this pathway
CREIGHTON_ENDOCRINE_THERAPY_RESISTANCE_3 720440All SZGR genes in this pathway
WHITFIELD_CELL_CYCLE_S 16286All SZGR genes in this pathway
WIERENGA_STAT5A_TARGETS_UP 217131All SZGR genes in this pathway
miRNA Targets ?
miRNA familyTarget positionmiRNA IDmiRNA seq
UTR startUTR endMatch method
miR-103/1073283341Ahsa-miR-103brainAGCAGCAUUGUACAGGGCUAUGA
hsa-miR-107brainAGCAGCAUUGUACAGGGCUAUCA
miR-299-5p2372431Ahsa-miR-299-5pUGGUUUACCGUCCCACAUACAU
miR-30-5p2532601A,m8hsa-miR-30a-5pUGUAAACAUCCUCGACUGGAAG
hsa-miR-30cbrainUGUAAACAUCCUACACUCUCAGC
hsa-miR-30dSZUGUAAACAUCCCCGACUGGAAG
hsa-miR-30bSZUGUAAACAUCCUACACUCAGCU
hsa-miR-30e-5pUGUAAACAUCCUUGACUGGA
miR-3253093161A,m8hsa-miR-325CCUAGUAGGUGUCCAGUAAGUGU
miR-369-3p1621681Ahsa-miR-369-3pAAUAAUACAUGGUUGAUCUUU
miR-374162168m8hsa-miR-374UUAUAAUACAACCUGAUAAGUG
miR-5433173231Ahsa-miR-543AAACAUUCGCGGUGCACUUCU
  • SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
  • Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.


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