Pulmonary Arterial Hypertension KnowledgeBase (bioinfom_tsdb)
bioinfom_tsdb
Pulmonary Arterial Hypertension KnowledgeBase
General information | Literature | Expression | Regulation | Variant | Interaction

Basic Information

Gene ID

3014

Name

H2AFX

Synonymous

H2A.X|H2A/X|H2AX;H2A histone family, member X;H2AFX;H2A histone family, member X

Definition

H2AX histone|histone H2A.x|histone H2AX

Position

11q23.3

Gene Type

protein-coding

Gene Regulation:

Upstream microRNAs
Transcription Factors
Post Transcriptional Modification From dbPTM
Methylation Profile From DiseaseMeth database

Experimentally verified miRNA from miRTarBase   [Top]

Experimentally validated miRNA-TS gene regulation information.

Transcription Factors   [Top]

Regulation From TransFac database

h2ax(h) + ATP --> h2ax(h){pS140} + ADP (phosphorylation)
h2ax(h) + ATP --> h2ax(h){p} + ADP (phosphorylation)
H2AFX(h) --> h2ax(h) (expression).
H2AFX(h) --> h2ax(h) (expression).
h2ax(h){pS140} --Wip1(m.s.)--> h2ax(h) + p (dephosphorylation)
h2ax(h){pS140} --> h2ax(h) + p (dephosphorylation)

Post Transcriptional Modification   [Top]

Location (AA)

PTM type

Literature

Database

2N-acetylserine (By similarity).Swiss-Prot 53.0
2Phosphoserine (By similarity).Swiss-Prot 53.0
140Phosphoserine (by ATM, ATR and PRKDC).Swiss-Prot 53.0
120Glycyl lysine isopeptide (Lys-Gly)(interchain with G-Cter in ubiquitin) (Bysimilarity).Swiss-Prot 53.0
139Phosphoserine (ATM)11571274Phospho.ELM 6.0
120Phosphothreonine16083285Phospho.ELM 6.0
123Phosphothreonine16083285Phospho.ELM 6.0

Methylation Profile   [Top]

Chromosome

Location

Source

chr11

Promoter: 118470887 - 118472887Agilent_014791

chr11

Promoter: 118470887 - 118472887GSE27584

chr11

Promoter: 118470887 - 118472887Agilent_014791_44K


')