Bioinformatics and Systems Medicine Laboratory
General information | Expression | Regulation | Mutation | Interaction

Basic Information

Gene ID

4089

Name

SMAD4

Synonymous

DPC4|JIP|MADH4;SMAD family member 4;SMAD4;SMAD family member 4

Definition

MAD homolog 4|SMAD, mothers against DPP homolog 4|deleted in pancreatic carcinoma locus 4|deletion target in pancreatic carcinoma 4|mothers against decapentaplegic homolog 4|mothers against decapentaplegic, Drosophila, homolog of, 4

Position

18q21.1

Gene Type

protein-coding

Gene Mutation:

Substitution
Insertion & Deletion
Other Mutation

Substitution

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Mutation (Type; AA; Chr)

Site

Histology

Substitution - coding silent; c.153A>G; 18:46827567-46827567

ovaryserous_carcinoma; carcinoma

Substitution - coding silent; c.1011G>A; 18:46845846-46845846

pancreasdysplasia-in_situ_neoplasm; other

Substitution - coding silent; c.924T>C; 18:46840253-46840253

thyroidadenoma-nodule-goitre

Substitution - coding silent; c.1482C>T; 18:46858658-46858658

thyroidpapillary_carcinoma; carcinoma

Indel

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Mutation (Type; AA; Chr)

Site

Histology

Deletion - Frameshift; c.1543delA; 18:46858719-46858719

pancreasductal_carcinoma; carcinoma

Deletion - Frameshift; c.1583_1586delACTT; 18:46858759-46858762

pancreasnon_functioning; carcinoid-endocrine_tumour

Deletion - Frameshift; c.378_379delCT; 18:46829182-46829183

vulvasquamous_cell_carcinoma; carcinoma

Deletion - In frame; c.1123_1134del12; 18:46845958-46845969

large_intestineadenocarcinoma; carcinoma

Deletion - Frameshift; c.1606_1612delCTAGACG; 18:46858782-46858788

lungcarcinoid-endocrine_tumour

Deletion - In frame; c.1015_1029del15; 18:46845850-46845864

large_intestineadenocarcinoma; carcinoma

Deletion - Frameshift; c.1341_1365del25; 18:46857038-46857062

large_intestineadenocarcinoma; carcinoma

Deletion - Frameshift; c.776_777delCT; 18:46838601-46838602

pancreasductal_carcinoma; carcinoma

Deletion - Frameshift; c.1546_1553delCAGAGCAT; 18:46858722-46858729

pancreasductal_carcinoma; carcinoma

Deletion - Frameshift; c.607_608delCC; 18:46835301-46835302

lungadenocarcinoma; carcinoma

Deletion - Frameshift; c.1134_1135delAG; 18:46845969-46845970

large_intestine; rectumadenocarcinoma; carcinoma

Deletion - Frameshift; c.978delT; 18:46845813-46845813

large_intestineadenocarcinoma; carcinoma

Deletion - Frameshift; c.585delC; 18:46835279-46835279

pancreasductal_carcinoma; carcinoma

Deletion - Frameshift; c.1600delC;

pancreasNS

Deletion - Frameshift; c.314_317delACAA;

pancreasNS

Deletion - Frameshift; c.804delG;

pancreasNS

Deletion - Frameshift; c.1546_1553delCAGAGCAT; 18:46858722-46858729

pancreasductal_carcinoma; carcinoma

Deletion - Frameshift; c.1607_1626del20; 18:46858783-46858802

large_intestine; colonadenocarcinoma; carcinoma

Deletion - Frameshift; c.1320_1377del58; 18:46857017-46857074

pancreasductal_carcinoma; carcinoma

Deletion - Frameshift; c.484_485delTA; 18:46835178-46835179

pancreasductal_carcinoma; carcinoma

Deletion - In frame; c.1015_1029del15; 18:46845850-46845864

large_intestineadenocarcinoma; carcinoma

Deletion - Frameshift; c.1349_1376del28; 18:46857046-46857073

large_intestineadenocarcinoma; carcinoma

Deletion - Frameshift; c.1548_1555delGAGCATCA;

pancreasNS

Deletion - Frameshift; c.1341_1365del25; 18:46857038-46857062

large_intestineadenocarcinoma; carcinoma

Deletion - Frameshift; c.968_974delGGTGTTC; 18:46845803-46845809

small_intestine; jejunumadenocarcinoma; carcinoma

Deletion - Frameshift; c.776_777delCT; 18:46838601-46838602

n; pancreasductal_carcinoma; carcinoma

Other Mutation

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Mutation (Type; AA; Chr)

Site

Histology

Whole gene deletion; c.1_1659del1659; 18:46827415-46858835

large_intestine; coloncarcinoma

Whole gene deletion; c.1_1659del1659; 18:46827415-46858835

pancreasductal_carcinoma; carcinoma

Whole gene deletion; c.1_1659del1659; 18:46827415-46858835

pancreasductal_carcinoma; carcinoma

Whole gene deletion; c.1_1659del1659; 18:46827415-46858835

pancreasductal_carcinoma; carcinoma

Whole gene deletion; c.1_1659del1659; 18:46827415-46858835

pancreasductal_carcinoma; carcinoma

Complex - compound substitutio; c.1049_1051TTG>ATA; 18:46845884-46845886

small_intestine; jejunumadenocarcinoma; carcinoma

Whole gene deletion; c.1_1659del1659; 18:46827415-46858835

breastcarcinoma

Whole gene deletion; c.1_1659del1659; 18:46827415-46858835

pancreasductal_carcinoma; carcinoma

Whole gene deletion; c.1_1659del1659; 18:46827415-46858835

pancreasductal_carcinoma; carcinoma

Whole gene deletion; c.1_1659del1659; 18:46827415-46858835

breastcarcinoma

Whole gene deletion; c.1_1659del1659; 18:46827415-46858835

pancreasductal_carcinoma; carcinoma

Whole gene deletion; c.1_1659del1659; 18:46827415-46858835

pancreasductal_carcinoma; carcinoma

Whole gene deletion; c.1_1659del1659; 18:46827415-46858835

large_intestineadenocarcinoma; carcinoma

Whole gene deletion; c.1_1659del1659; 18:46827415-46858835

pancreasductal_carcinoma; carcinoma

Whole gene deletion; c.1_1659del1659; 18:46827415-46858835

pancreasductal_carcinoma; carcinoma

Whole gene deletion; c.1_1659del1659; 18:46827415-46858835

pancreasductal_carcinoma; carcinoma

Whole gene deletion; c.1_1659del1659; 18:46827415-46858835

pancreasductal_carcinoma; carcinoma

Whole gene deletion; c.1_1659del1659; 18:46827415-46858835

stomachadenocarcinoma; carcinoma

Whole gene deletion; c.1_1659del1659; 18:46827415-46858835

pancreasductal_carcinoma; carcinoma

Complex - frameshift; c.121_135>A; 18:46827535-46827549

oesophaguscarcinoma

Whole gene deletion; c.1_1659del1659; 18:46827415-46858835

pancreasductal_carcinoma; carcinoma

Whole gene deletion; c.1_1659del1659; 18:46827415-46858835

pancreasductal_carcinoma; carcinoma

Whole gene deletion; c.1_1659del1659; 18:46827415-46858835

pancreasductal_carcinoma; carcinoma

Whole gene deletion; c.1_1659del1659; 18:46827415-46858835

breastcarcinoma

Whole gene deletion; c.?;

large_intestine; colon; sigmoidadenocarcinoma; carcinoma

Whole gene deletion; c.?;

large_intestine; rectumadenocarcinoma; carcinoma

Whole gene deletion; c.1_1659del1659; 18:46827415-46858835

oesophagusadenocarcinoma; carcinoma

Whole gene deletion; c.1_1659del1659; 18:46827415-46858835

upper_aerodigestive_tract; pharynx; hypopharynxsquamous_cell_carcinoma; carcinoma

Whole gene deletion; c.1_1659del1659; 18:46827415-46858835

lungnon_small_cell_carcinoma; carcinoma

Whole gene deletion; c.1_1659del1659; 18:46827415-46858835

lungnon_small_cell_carcinoma; carcinoma

Whole gene deletion; c.1_1659del1659; 18:46827415-46858835

pancreasductal_carcinoma; carcinoma

Whole gene deletion; c.1_1659del1659; 18:46827415-46858835

pancreasductal_carcinoma; carcinoma

Whole gene deletion; c.1_1659del1659; 18:46827415-46858835

pancreasductal_carcinoma; carcinoma

Whole gene deletion; c.1_1659del1659; 18:46827415-46858835

pancreasductal_carcinoma; carcinoma

Whole gene deletion; c.1_1659del1659; 18:46827415-46858835

pancreasductal_carcinoma; carcinoma

Whole gene deletion; c.1_1659del1659; 18:46827415-46858835

pancreasductal_carcinoma; carcinoma

Whole gene deletion; c.1_1659del1659; 18:46827415-46858835

stomachadenocarcinoma; carcinoma

Whole gene deletion; c.1_1659del1659; 18:46827415-46858835

pancreasductal_carcinoma; carcinoma

Whole gene deletion; c.1_1659del1659; 18:46827415-46858835

pancreasductal_carcinoma; carcinoma

Whole gene deletion; c.1_1659del1659; 18:46827415-46858835

pancreasductal_carcinoma; carcinoma

Whole gene deletion; c.1_1659del1659; 18:46827415-46858835

pancreasductal_carcinoma; carcinoma

Whole gene deletion; c.?;

large_intestine; colon; leftadenocarcinoma; carcinoma


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