DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
AKEND
Uniprot ID:
O14579
Source protein:
Coatomer subunit epsilon
Source gene:
COPE
Class:
DEG_APCC_KENBOX_2
Location:
292:296
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.5608
ASA_SCORE:
62.54
COIL:
0.0278
CONS_SCORE:
0.4259
DSS_SCORE:
0.2785
HELIX:
0.9716
FCONS_SCORE:
1.0846
RIG_SCORE:
0.7821
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.K288N
TCGA-EE-A183
SKCM
TCGA
AKEND
DEG_APCC_KENBOX_2
0.6667
p.L302P
TCGA-LN-A4A3
ESCA
TCGA
AKEND
DEG_APCC_KENBOX_2
0.1667
p.Q299L
DO45475
LUSC
ICGC
AKEND
DEG_APCC_KENBOX_2
0.25
p.L302V
ACH-000710
Lung Cancer
CCLE
AKEND
DEG_APCC_KENBOX_2
0.1667
p.P285L
ACH-000835
Sarcoma
CCLE
AKEND
DEG_APCC_KENBOX_2
0.1389
p.P285L
GCT
soft_tissue
COSMIC
AKEND
DEG_APCC_KENBOX_2
0.1389
p.D298V
ACH-001131
Skin Cancer
CCLE
AKEND
DEG_APCC_KENBOX_2
0.2778
p.D298V
ACH-001958
lung
CCLE
AKEND
DEG_APCC_KENBOX_2
0.2778
p.D298V
MS-1
lung
COSMIC
AKEND
DEG_APCC_KENBOX_2
0.2778
Drug responses associated with COPE mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of AKEND
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O14579
Coatomer subunit epsilon
DEG_APCC_KENBOX_2
292:296
AKEND
APC,CDC20,FZR1
0.5608
More...
P49756
RNA-binding protein 25
DEG_APCC_KENBOX_2
76:80
AKEND
APC,CDC20,FZR1
0.7457
More...