DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
AMSST
Uniprot ID:
Q6P2E9
Source protein:
Enhancer of mRNA-decapping protein 4
Source gene:
EDC4
Class:
DEG_SPOP_SBC_1
Location:
635:639
E3 ligase:
SPOP
DEGRON score:
0.9795
ASA_SCORE:
83.78
COIL:
0.8278
CONS_SCORE:
0.3579
DSS_SCORE:
0.4734
HELIX:
0.1594
FCONS_SCORE:
1.0635
RIG_SCORE:
0.585
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S638N
TCGA-38-4629
LUAD
TCGA
AMSST
DEG_SPOP_SBC_1
0.7069
p.S638N
DO23771
LUAD
ICGC
AMSST
DEG_SPOP_SBC_1
0.7069
p.S626I
TCGA-CV-6955
HNSC
TCGA
AMSST
DEG_SPOP_SBC_1
0.0833
p.S626I
DO14338
HNSC
ICGC
AMSST
DEG_SPOP_SBC_1
0.0833
p.S638I
TCGA-GN-A265
SKCM
TCGA
AMSST
DEG_SPOP_SBC_1
0.7341
p.S638I
DO37491
SKCM
ICGC
AMSST
DEG_SPOP_SBC_1
0.7341
p.T647I
TCGA-XK-AAIW
PRAD
TCGA
AMSST
DEG_SPOP_SBC_1
0.1111
p.T647I
DO51407
PRAD
ICGC
AMSST
DEG_SPOP_SBC_1
0.1111
p.S645C
DO233260
GACA
ICGC
AMSST
DEG_SPOP_SBC_1
0.1667
p.S629F
DO231140
LAML
ICGC
AMSST
DEG_SPOP_SBC_1
0.1667
Drug responses associated with EDC4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of AMSST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q6P2E9
Enhancer of mRNA-decapping protein 4
DEG_SPOP_SBC_1
635:639
AMSST
SPOP
0.9795
More...
Q96M27
Protein PRRC1
DEG_SPOP_SBC_1
26:30
AMSST
SPOP
0.9002
More...