DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
AMSST
Uniprot ID:
Q96M27
Source protein:
Protein PRRC1
Source gene:
PRRC1
Class:
DEG_SPOP_SBC_1
Location:
26:30
E3 ligase:
SPOP
DEGRON score:
0.9002
ASA_SCORE:
85.14
COIL:
0.932
CONS_SCORE:
0.2407
DSS_SCORE:
0.5087
HELIX:
0.0396
FCONS_SCORE:
0.7266
RIG_SCORE:
0.6643
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G21W
TCGA-AX-A1CE
UCEC
TCGA
AMSST
DEG_SPOP_SBC_1
0.1944
p.G21W
TCGA-D3-A2J6
SKCM
TCGA
AMSST
DEG_SPOP_SBC_1
0.1944
p.G21W
DO37901
SKCM
ICGC
AMSST
DEG_SPOP_SBC_1
0.1944
p.G21W
DO42280
UCEC
ICGC
AMSST
DEG_SPOP_SBC_1
0.1944
p.V32F
DO228181
PBCA
ICGC
AMSST
DEG_SPOP_SBC_1
0.2778
p.P31A
SIDM00819
Kidney Carcinoma
GDSC
AMSST
DEG_SPOP_SBC_1
0.3056
p.P31A
ACH-002189
Kidney Cancer
CCLE
AMSST
DEG_SPOP_SBC_1
0.3056
p.P31A
RCC-FG2
kidney
COSMIC
AMSST
DEG_SPOP_SBC_1
0.3056
Drug responses associated with PRRC1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of AMSST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q6P2E9
Enhancer of mRNA-decapping protein 4
DEG_SPOP_SBC_1
635:639
AMSST
SPOP
0.9795
More...
Q96M27
Protein PRRC1
DEG_SPOP_SBC_1
26:30
AMSST
SPOP
0.9002
More...