DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
ARFLLSKVN
Uniprot ID:
Q15436
Source protein:
Protein transport protein Sec23A
Source gene:
SEC23A
Class:
DEG_APCC_DBOX_1
Location:
715:723
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.7446
ASA_SCORE:
29.1778
COIL:
0.243
CONS_SCORE:
0.7714
DSS_SCORE:
0.4861
HELIX:
0.0261
FCONS_SCORE:
1.3731
RIG_SCORE:
0.7569
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R716C
TCGA-17-Z053
LUAD
TCGA
ARFLLSKVN
DEG_APCC_DBOX_1
0.8301
p.G711E
TCGA-A5-A0G2
UCEC
TCGA
ARFLLSKVN
DEG_APCC_DBOX_1
0.2222
p.S713G
TCGA-AX-A06F
UCEC
TCGA
ARFLLSKVN
DEG_APCC_DBOX_1
0.7222
p.S713N
TCGA-BR-8059
STAD
TCGA
ARFLLSKVN
DEG_APCC_DBOX_1
0.7222
p.R716H
TCGA-CK-4951
COAD
TCGA
ARFLLSKVN
DEG_APCC_DBOX_1
0.8244
p.R716H
TCGA-E6-A2P8
UCEC
TCGA
ARFLLSKVN
DEG_APCC_DBOX_1
0.8244
p.T708I
TCGA-CV-7434
HNSC
TCGA
ARFLLSKVN
DEG_APCC_DBOX_1
0.1389
p.R716S
TCGA-D3-A2J6
SKCM
TCGA
ARFLLSKVN
DEG_APCC_DBOX_1
0.7427
p.M731I
TCGA-DI-A1BU
UCEC
TCGA
ARFLLSKVN
DEG_APCC_DBOX_1
0.1111
p.A731T
CTV-1
haematopoietic_and_lymphoid_tissue
COSMIC
ARFLLSKVN
DEG_APCC_DBOX_1
0.1111
Drug responses associated with SEC23A mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of ARFLLSKVN
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q15436
Protein transport protein Sec23A
DEG_APCC_DBOX_1
715:723
ARFLLSKVN
APC,CDC20,FZR1
0.7446
More...
Q15437
Protein transport protein Sec23B
DEG_APCC_DBOX_1
717:725
ARFLLSKVN
APC,CDC20,FZR1
0.8854
More...