DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
ARFLLSKVN
Uniprot ID:
Q15437
Source protein:
Protein transport protein Sec23B
Source gene:
SEC23B
Class:
DEG_APCC_DBOX_1
Location:
717:725
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8854
ASA_SCORE:
29.1333
COIL:
0.2387
CONS_SCORE:
0.7688
DSS_SCORE:
0.4465
HELIX:
0.0082
FCONS_SCORE:
1.3761
RIG_SCORE:
0.7602
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R718Q
TCGA-AP-A1DV
UCEC
TCGA
ARFLLSKVN
DEG_APCC_DBOX_1
0.7329
p.R718Q
DO43186
UCEC
ICGC
ARFLLSKVN
DEG_APCC_DBOX_1
0.7329
p.E711K
TCGA-GV-A3JZ
BLCA
TCGA
ARFLLSKVN
DEG_APCC_DBOX_1
0.1667
p.E711K
DO773
BLCA
ICGC
ARFLLSKVN
DEG_APCC_DBOX_1
0.1667
p.T710M
TCGA-R6-A8W8
ESCA
TCGA
ARFLLSKVN
DEG_APCC_DBOX_1
0.1389
p.R718L
DO229025
LICA
ICGC
ARFLLSKVN
DEG_APCC_DBOX_1
0.8428
p.I708V
SIDM00356
Non-Small Cell Lung Carcinoma
GDSC
ARFLLSKVN
DEG_APCC_DBOX_1
0.0833
p.I708V
SIDM00289
B-Lymphoblastic Leukemia
GDSC
ARFLLSKVN
DEG_APCC_DBOX_1
0.0833
p.I708V
SIDM01573
Plasma Cell Myeloma
GDSC
ARFLLSKVN
DEG_APCC_DBOX_1
0.0833
p.I708V
SIDM00016
Neuroblastoma
GDSC
ARFLLSKVN
DEG_APCC_DBOX_1
0.0833
p.I708V
RERF-LC-KJ
lung
COSMIC
ARFLLSKVN
DEG_APCC_DBOX_1
0.0833
p.I708V
HAL-01
haematopoietic_and_lymphoid_tissue
COSMIC
ARFLLSKVN
DEG_APCC_DBOX_1
0.0833
Drug responses associated with SEC23B mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of ARFLLSKVN
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q15436
Protein transport protein Sec23A
DEG_APCC_DBOX_1
715:723
ARFLLSKVN
APC,CDC20,FZR1
0.7446
More...
Q15437
Protein transport protein Sec23B
DEG_APCC_DBOX_1
717:725
ARFLLSKVN
APC,CDC20,FZR1
0.8854
More...