DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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Degron:
AWTTS
Uniprot ID:
Q0VD83
Source protein:
Apolipoprotein B receptor
Source gene:
APOBR
Class:
DEG_SPOP_SBC_1
Location:
372:376
E3 ligase:
SPOP
DEGRON score:
0.9922
ASA_SCORE:
83.96
COIL:
0.7664
CONS_SCORE:
0.7248
DSS_SCORE:
0.6316
HELIX:
0.1958
FCONS_SCORE:
1.2067
RIG_SCORE:
0.7221
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G369E
TCGA-E1-5302
LGG
TCGA
AWTTS
DEG_SPOP_SBC_1
0.25
p.A366T
TCGA-YA-A8S7
LIHC
TCGA
AWTTS
DEG_SPOP_SBC_1
0.1667
p.W364G
DO222905
BTCA
ICGC
AWTTS
DEG_SPOP_SBC_1
0.1111
p.A372V
DO233179
GACA
ICGC
AWTTS
DEG_SPOP_SBC_1
0.5825
p.G383R
DO222632
MELA
ICGC
AWTTS
DEG_SPOP_SBC_1
0.1389
p.G383R
DO37571
SKCM
ICGC
AWTTS
DEG_SPOP_SBC_1
0.1389
p.P386Q
DO37511
SKCM
ICGC
AWTTS
DEG_SPOP_SBC_1
0.0556
p.P386Q
DO37571
SKCM
ICGC
AWTTS
DEG_SPOP_SBC_1
0.0556
p.P386Q
DO47459
SKCM
ICGC
AWTTS
DEG_SPOP_SBC_1
0.0556
p.P386S
DO47331
SKCM
ICGC
AWTTS
DEG_SPOP_SBC_1
0.0556
Drug responses associated with APOBR mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of AWTTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
A1L4H1
Soluble scavenger receptor cysteine-rich domain-containing protein SSC5D
DEG_SPOP_SBC_1
1549:1553
AWTTS
SPOP
0.9738
More...
Q0VD83
Apolipoprotein B receptor
DEG_SPOP_SBC_1
372:376
AWTTS
SPOP
0.9922
More...
A8MTL3
RING finger protein 212B
DEG_SPOP_SBC_1
295:299
AWTTS
SPOP
0.8048
More...