DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
CKENP
Uniprot ID:
Q96SN8
Source protein:
CDK5 regulatory subunit-associated protein 2
Source gene:
CDK5RAP2
Class:
DEG_APCC_KENBOX_2
Location:
1065:1069
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9992
ASA_SCORE:
96.84
COIL:
0.7836
CONS_SCORE:
0.4169
DSS_SCORE:
0.5669
HELIX:
0.1952
FCONS_SCORE:
1.2103
RIG_SCORE:
0.668
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S1061N
TCGA-2W-A8YY
CESC
TCGA
CKENP
DEG_APCC_KENBOX_2
0.6667
p.S1061N
DO223732
CESC
ICGC
CKENP
DEG_APCC_KENBOX_2
0.6667
p.N1068K
TCGA-AP-A1DQ
UCEC
TCGA
CKENP
DEG_APCC_KENBOX_2
0.6918
p.N1068K
DO41259
UCEC
ICGC
CKENP
DEG_APCC_KENBOX_2
0.6918
p.S1077A
TCGA-E6-A1M0
UCEC
TCGA
CKENP
DEG_APCC_KENBOX_2
0.5556
p.S1077A
DO43682
UCEC
ICGC
CKENP
DEG_APCC_KENBOX_2
0.5556
p.S1077L
DO50727
ORCA
ICGC
CKENP
DEG_APCC_KENBOX_2
0.5556
p.P1069T
SIDM02021
Esophageal Carcinoma
GDSC
CKENP
DEG_APCC_KENBOX_2
0.5919
p.P1069T
SIDM00481
Ovarian Carcinoma
GDSC
CKENP
DEG_APCC_KENBOX_2
0.5919
p.P1069T
ACH-000116
Ovarian Cancer
CCLE
CKENP
DEG_APCC_KENBOX_2
0.5919
p.P1069T
OAW-28
ovary
COSMIC
CKENP
DEG_APCC_KENBOX_2
0.5919
p.L1059I
SIDM00789
Colorectal Carcinoma
GDSC
CKENP
DEG_APCC_KENBOX_2
0.1667
p.L1059I
ACH-000997
Colon/Colorectal Cancer
CCLE
CKENP
DEG_APCC_KENBOX_2
0.1667
p.L1059I
HCT-15
large_intestine
COSMIC
CKENP
DEG_APCC_KENBOX_2
0.1667
p.A1076V
HCC-15
lung
COSMIC
CKENP
DEG_APCC_KENBOX_2
0.5833
Drug responses associated with CDK5RAP2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of CKENP
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8N3F8
MICAL-like protein 1
DEG_APCC_KENBOX_2
630:634
CKENP
APC,CDC20,FZR1
0.9989
More...
Q96SN8
CDK5 regulatory subunit-associated protein 2
DEG_APCC_KENBOX_2
1065:1069
CKENP
APC,CDC20,FZR1
0.9992
More...