DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
DSGDNS
Uniprot ID:
Q8IXQ3
Source protein:
Uncharacterized protein C9orf40
Source gene:
C9orf40
Class:
DEG_SCF_TRCP1_1
Location:
75:80
E3 ligase:
BTRC
DEGRON score:
0.9539
ASA_SCORE:
83.7167
COIL:
0.9265
CONS_SCORE:
0.5025
DSS_SCORE:
0.8997
HELIX:
0.0555
FCONS_SCORE:
0.8687
RIG_SCORE:
0.4609
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S67W
TCGA-CV-A6JM
HNSC
TCGA
DSGDNS
DEG_SCF_TRCP1_1
0.5556
p.S67W
DO49991
HNSC
ICGC
DSGDNS
DEG_SCF_TRCP1_1
0.5556
p.P66T
DO25189
LUAD
ICGC
DSGDNS
DEG_SCF_TRCP1_1
0.0833
p.E88D
ACH-000592
Brain Cancer
CCLE
DSGDNS
DEG_SCF_TRCP1_1
0.1111
Drug responses associated with C9orf40 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of DSGDNS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O95263
High affinity cAMP-specific and IBMX-insensitive 3',5'-cyclic phosphodiesterase 8B
DEG_SCF_TRCP1_1
396:401
DSGDNS
BTRC
0.9782
More...
Q8IXQ3
Uncharacterized protein C9orf40
DEG_SCF_TRCP1_1
75:80
DSGDNS
BTRC
0.9539
More...