DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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Degron:
DSGEES
Uniprot ID:
Q8TBB5
Source protein:
Kelch domain-containing protein 4
Source gene:
KLHDC4
Class:
DEG_SCF_TRCP1_1
Location:
511:516
E3 ligase:
BTRC
DEGRON score:
0.8231
ASA_SCORE:
98.2167
COIL:
0.9375
CONS_SCORE:
0.3325
DSS_SCORE:
0.9967
HELIX:
0.0453
FCONS_SCORE:
0.819
RIG_SCORE:
0.5778
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E504A
TCGA-AP-A054
UCEC
TCGA
DSGEES
DEG_SCF_TRCP1_1
0.1389
p.G513R
TCGA-AR-A0U4
BRCA
TCGA
DSGEES
DEG_SCF_TRCP1_1
0.7568
p.A518V
TCGA-BT-A3PH
BLCA
TCGA
DSGEES
DEG_SCF_TRCP1_1
0.2778
p.G506V
TCGA-D3-A2J6
SKCM
TCGA
DSGEES
DEG_SCF_TRCP1_1
0.1944
p.E515K
TCGA-EB-A5UN
SKCM
TCGA
DSGEES
DEG_SCF_TRCP1_1
0.591
p.D508N
SIDM00676
Bladder Carcinoma
GDSC
DSGEES
DEG_SCF_TRCP1_1
0.25
p.G506R
SIDM01114
Non-Cancerous
GDSC
DSGEES
DEG_SCF_TRCP1_1
0.1944
p.G506R
SIDM00734
Non-Small Cell Lung Carcinoma
GDSC
DSGEES
DEG_SCF_TRCP1_1
0.1944
p.G506R
SIDM01680
Non-Cancerous
GDSC
DSGEES
DEG_SCF_TRCP1_1
0.1944
p.G506R
SIDM01083
Oral Cavity Carcinoma
GDSC
DSGEES
DEG_SCF_TRCP1_1
0.1944
Drug responses associated with KLHDC4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of DSGEES
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8TBB5
Kelch domain-containing protein 4
DEG_SCF_TRCP1_1
511:516
DSGEES
BTRC
0.8231
More...
Q99457
Nucleosome assembly protein 1-like 3
DEG_SCF_TRCP1_1
28:33
DSGEES
BTRC
0.8883
More...