DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
DSGGGGT
Uniprot ID:
Q8TD26
Source protein:
Chromodomain-helicase-DNA-binding protein 6
Source gene:
CHD6
Class:
DEG_SCF_TRCP1_1
Location:
84:90
E3 ligase:
BTRC
DEGRON score:
0.9991
ASA_SCORE:
70.1857
COIL:
0.9589
CONS_SCORE:
0.4258
DSS_SCORE:
0.715
HELIX:
0.0151
FCONS_SCORE:
1.1278
RIG_SCORE:
0.5092
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G88R
TCGA-49-4487
LUAD
TCGA
DSGGGGT
DEG_SCF_TRCP1_1
0.6457
p.G88R
DO24780
LUAD
ICGC
DSGGGGT
DEG_SCF_TRCP1_1
0.6457
p.G81E
TCGA-DX-AB2E
SARC
TCGA
DSGGGGT
DEG_SCF_TRCP1_1
0.25
p.G81E
DO220073
SARC
ICGC
DSGGGGT
DEG_SCF_TRCP1_1
0.25
p.K99T
TCGA-EC-A1QX
UCEC
TCGA
DSGGGGT
DEG_SCF_TRCP1_1
0.1944
p.K99T
DO42592
UCEC
ICGC
DSGGGGT
DEG_SCF_TRCP1_1
0.1944
p.G88E
TCGA-MA-AA3Z
CESC
TCGA
DSGGGGT
DEG_SCF_TRCP1_1
0.6087
p.G88E
DO219722
CESC
ICGC
DSGGGGT
DEG_SCF_TRCP1_1
0.6087
p.E83A
DO222737
COCA
ICGC
DSGGGGT
DEG_SCF_TRCP1_1
0.3056
p.H79R
DO50453
ESAD
ICGC
DSGGGGT
DEG_SCF_TRCP1_1
0.1944
p.T90I
DO234234
ESAD
ICGC
DSGGGGT
DEG_SCF_TRCP1_1
0.7078
p.K99E
DO45299
LIRI
ICGC
DSGGGGT
DEG_SCF_TRCP1_1
0.1944
p.T90A
SIDM00847
Rhabdomyosarcoma
GDSC
DSGGGGT
DEG_SCF_TRCP1_1
0.7139
p.T90A
SIDM00688
B-Cell Non-Hodgkin's Lymphoma
GDSC
DSGGGGT
DEG_SCF_TRCP1_1
0.7139
p.T90A
ACH-000169
Sarcoma
CCLE
DSGGGGT
DEG_SCF_TRCP1_1
0.7139
p.T90A
ACH-002253
Lymphoma
CCLE
DSGGGGT
DEG_SCF_TRCP1_1
0.7139
p.T90A
JSC-1
haematopoietic_and_lymphoid_tissue
COSMIC
DSGGGGT
DEG_SCF_TRCP1_1
0.7139
p.T90A
RD
soft_tissue
COSMIC
DSGGGGT
DEG_SCF_TRCP1_1
0.7139
p.K97R
ACH-000128
Brain Cancer
CCLE
DSGGGGT
DEG_SCF_TRCP1_1
0.25
Drug responses associated with CHD6 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of DSGGGGT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8IWZ3
Ankyrin repeat and KH domain-containing protein 1
DEG_SCF_TRCP1_1
4:10
DSGGGGT
BTRC
0.9634
More...
Q8TD26
Chromodomain-helicase-DNA-binding protein 6
DEG_SCF_TRCP1_1
84:90
DSGGGGT
BTRC
0.9991
More...