DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
DSGISS
Uniprot ID:
Q9BXP8
Source protein:
Pappalysin-2
Source gene:
PAPPA2
Class:
DEG_SCF_TRCP1_1
Location:
212:217
E3 ligase:
BTRC
DEGRON score:
0.6909
ASA_SCORE:
53.9833
COIL:
0.7608
CONS_SCORE:
0.2513
DSS_SCORE:
0.6742
HELIX:
0.162
FCONS_SCORE:
0.7427
RIG_SCORE:
0.5568
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G214C
TCGA-05-4382
LUAD
TCGA
DSGISS
DEG_SCF_TRCP1_1
0.76
p.G214C
DO24900
LUAD
ICGC
DSGISS
DEG_SCF_TRCP1_1
0.76
p.G214A
TCGA-05-4382
LUAD
TCGA
DSGISS
DEG_SCF_TRCP1_1
0.754
p.G214A
DO24900
LUAD
ICGC
DSGISS
DEG_SCF_TRCP1_1
0.754
p.R205P
TCGA-35-3615
LUAD
TCGA
DSGISS
DEG_SCF_TRCP1_1
0.1389
p.R205P
TCGA-CN-A63U
HNSC
TCGA
DSGISS
DEG_SCF_TRCP1_1
0.1389
p.R205P
DO44454
HNSC
ICGC
DSGISS
DEG_SCF_TRCP1_1
0.1389
p.R205P
DO23627
LUAD
ICGC
DSGISS
DEG_SCF_TRCP1_1
0.1389
p.Q210H
TCGA-55-8089
LUAD
TCGA
DSGISS
DEG_SCF_TRCP1_1
0.2778
p.Q210H
DO23690
LUAD
ICGC
DSGISS
DEG_SCF_TRCP1_1
0.2778
p.K224N
TCGA-73-A9RS
LUAD
TCGA
DSGISS
DEG_SCF_TRCP1_1
0.25
p.K224N
DO51193
LUAD
ICGC
DSGISS
DEG_SCF_TRCP1_1
0.25
p.W222C
TCGA-CN-5360
HNSC
TCGA
DSGISS
DEG_SCF_TRCP1_1
0.1944
p.W222C
TCGA-OR-A5KB
ACC
TCGA
DSGISS
DEG_SCF_TRCP1_1
0.1944
p.W222C
DO14662
HNSC
ICGC
DSGISS
DEG_SCF_TRCP1_1
0.1944
p.S226F
TCGA-ER-A19H
SKCM
TCGA
DSGISS
DEG_SCF_TRCP1_1
0.0833
p.S226F
DO47299
SKCM
ICGC
DSGISS
DEG_SCF_TRCP1_1
0.0833
p.G211R
TCGA-GN-A266
SKCM
TCGA
DSGISS
DEG_SCF_TRCP1_1
0.3056
p.G211R
DO37432
SKCM
ICGC
DSGISS
DEG_SCF_TRCP1_1
0.3056
p.G211R
ACH-001414
Bladder Cancer
CCLE
DSGISS
DEG_SCF_TRCP1_1
0.3056
p.R204K
TCGA-GN-A4U4
SKCM
TCGA
DSGISS
DEG_SCF_TRCP1_1
0.1111
p.R204K
DO51256
SKCM
ICGC
DSGISS
DEG_SCF_TRCP1_1
0.1111
p.P223H
TCGA-MP-A4T7
LUAD
TCGA
DSGISS
DEG_SCF_TRCP1_1
0.1667
p.P223H
DO45370
LUAD
ICGC
DSGISS
DEG_SCF_TRCP1_1
0.1667
p.K224T
TCGA-RP-A693
SKCM
TCGA
DSGISS
DEG_SCF_TRCP1_1
0.25
p.K224T
DO51268
SKCM
ICGC
DSGISS
DEG_SCF_TRCP1_1
0.25
p.P221H
TCGA-VQ-A8P2
STAD
TCGA
DSGISS
DEG_SCF_TRCP1_1
0.2222
p.P221H
DO51761
STAD
ICGC
DSGISS
DEG_SCF_TRCP1_1
0.2222
p.R205W
DO35114
PACA
ICGC
DSGISS
DEG_SCF_TRCP1_1
0.1389
p.G209E
SIDM01307
Colorectal Carcinoma
GDSC
DSGISS
DEG_SCF_TRCP1_1
0.25
p.A206V
SIDM00834
Colorectal Carcinoma
GDSC
DSGISS
DEG_SCF_TRCP1_1
0.1667
p.A206V
SW1463
large_intestine
COSMIC
DSGISS
DEG_SCF_TRCP1_1
0.1667
p.W202L
SIDM01099
Neuroblastoma
GDSC
DSGISS
DEG_SCF_TRCP1_1
0.0556
p.W202L
ACH-000341
Neuroblastoma
CCLE
DSGISS
DEG_SCF_TRCP1_1
0.0556
p.W202L
SK-N-FI
autonomic_ganglia
COSMIC
DSGISS
DEG_SCF_TRCP1_1
0.0556
p.A206E
SIDM01125
Non-Small Cell Lung Carcinoma
GDSC
DSGISS
DEG_SCF_TRCP1_1
0.1667
p.A206E
NCI-H647
lung
COSMIC
DSGISS
DEG_SCF_TRCP1_1
0.1667
p.S213T
ACH-001147
Lymphoma
CCLE
DSGISS
DEG_SCF_TRCP1_1
0.7116
p.K203N
ACH-001608
Brain Cancer
CCLE
DSGISS
DEG_SCF_TRCP1_1
0.1944
Drug responses associated with PAPPA2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of DSGISS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P04843
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1
DEG_SCF_TRCP1_1
271:276
DSGISS
BTRC
0.5317
More...
Q9BXP8
Pappalysin-2
DEG_SCF_TRCP1_1
212:217
DSGISS
BTRC
0.6909
More...