DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
DSGPRS
Uniprot ID:
Q6ZMP0
Source protein:
Thrombospondin type-1 domain-containing protein 4
Source gene:
THSD4
Class:
DEG_SCF_TRCP1_1
Location:
228:233
E3 ligase:
BTRC
DEGRON score:
0.9377
ASA_SCORE:
78.3167
COIL:
0.8467
CONS_SCORE:
0.42
DSS_SCORE:
0.662
HELIX:
0.1023
FCONS_SCORE:
0.9662
RIG_SCORE:
0.588
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G222E
TCGA-06-2565
GBM
TCGA
DSGPRS
DEG_SCF_TRCP1_1
0.1667
p.G222E
DO12730
GBM
ICGC
DSGPRS
DEG_SCF_TRCP1_1
0.1667
p.A238V
TCGA-06-A6S1
GBM
TCGA
DSGPRS
DEG_SCF_TRCP1_1
0.1944
p.A238V
DO50113
GBM
ICGC
DSGPRS
DEG_SCF_TRCP1_1
0.1944
p.A238V
SIDM00442
Thyroid Gland Carcinoma
GDSC
DSGPRS
DEG_SCF_TRCP1_1
0.1944
p.A238V
ML-1
thyroid
COSMIC
DSGPRS
DEG_SCF_TRCP1_1
0.1944
p.R232C
TCGA-D9-A6EC
SKCM
TCGA
DSGPRS
DEG_SCF_TRCP1_1
0.719
p.R232C
TCGA-FW-A3R5
SKCM
TCGA
DSGPRS
DEG_SCF_TRCP1_1
0.719
p.R232C
DO48314
ESCA
ICGC
DSGPRS
DEG_SCF_TRCP1_1
0.719
p.R232C
DO220875
MELA
ICGC
DSGPRS
DEG_SCF_TRCP1_1
0.719
p.R232C
DO37406
SKCM
ICGC
DSGPRS
DEG_SCF_TRCP1_1
0.719
p.R232C
DO50291
SKCM
ICGC
DSGPRS
DEG_SCF_TRCP1_1
0.719
p.D228N
TCGA-FI-A2D0
UCEC
TCGA
DSGPRS
DEG_SCF_TRCP1_1
0.6932
p.D228N
TCGA-GF-A6C9
SKCM
TCGA
DSGPRS
DEG_SCF_TRCP1_1
0.6932
p.D228N
DO51254
SKCM
ICGC
DSGPRS
DEG_SCF_TRCP1_1
0.6932
p.D228N
DO43891
UCEC
ICGC
DSGPRS
DEG_SCF_TRCP1_1
0.6932
p.P219S
TCGA-FR-A69P
SKCM
TCGA
DSGPRS
DEG_SCF_TRCP1_1
0.0833
p.P219S
DO47292
SKCM
ICGC
DSGPRS
DEG_SCF_TRCP1_1
0.0833
p.A240P
DO233754
GACA
ICGC
DSGPRS
DEG_SCF_TRCP1_1
0.1389
p.R232H
SIDM00555
Glioblastoma
GDSC
DSGPRS
DEG_SCF_TRCP1_1
0.7133
p.R232H
ACH-000631
Brain Cancer
CCLE
DSGPRS
DEG_SCF_TRCP1_1
0.7133
p.R232H
KS-1
central_nervous_system
COSMIC
DSGPRS
DEG_SCF_TRCP1_1
0.7133
Drug responses associated with THSD4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of DSGPRS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q6ZMP0
Thrombospondin type-1 domain-containing protein 4
DEG_SCF_TRCP1_1
228:233
DSGPRS
BTRC
0.9377
More...
Q5H9K5
Zinc finger matrin-type protein 1
DEG_SCF_TRCP1_1
344:349
DSGPRS
BTRC
0.9991
More...