DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
DSGSQS
Uniprot ID:
O14647
Source protein:
Chromodomain-helicase-DNA-binding protein 2
Source gene:
CHD2
Class:
DEG_SCF_TRCP1_1
Location:
32:37
E3 ligase:
BTRC
DEGRON score:
0.9609
ASA_SCORE:
90.1833
COIL:
0.922
CONS_SCORE:
0.2687
DSS_SCORE:
0.8743
HELIX:
0.0527
FCONS_SCORE:
1.119
RIG_SCORE:
0.4288
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S37L
TCGA-AX-A060
UCEC
TCGA
DSGSQS
DEG_SCF_TRCP1_1
0.7667
p.S23L
TCGA-YC-A89H
BLCA
TCGA
DSGSQS
DEG_SCF_TRCP1_1
0.0833
p.S36L
DO51948
BLCA
ICGC
DSGSQS
DEG_SCF_TRCP1_1
0.7667
p.D29N
DO234205
ESAD
ICGC
DSGSQS
DEG_SCF_TRCP1_1
0.25
p.D29N
DO234285
ESAD
ICGC
DSGSQS
DEG_SCF_TRCP1_1
0.25
p.D29N
DO228941
LICA
ICGC
DSGSQS
DEG_SCF_TRCP1_1
0.25
p.S24T
DO233841
GACA
ICGC
DSGSQS
DEG_SCF_TRCP1_1
0.1111
p.S36A
DO233917
GACA
ICGC
DSGSQS
DEG_SCF_TRCP1_1
0.7588
p.Q36E
ACH-000520
Ovarian Cancer
CCLE
DSGSQS
DEG_SCF_TRCP1_1
0.5633
p.G36E
K2
skin
COSMIC
DSGSQS
DEG_SCF_TRCP1_1
0.7199
p.F27V
L-1236
haematopoietic_and_lymphoid_tissue
COSMIC
DSGSQS
DEG_SCF_TRCP1_1
0.1944
p.L24I
Capan-2
pancreas
COSMIC
DSGSQS
DEG_SCF_TRCP1_1
0.1111
p.G36R
K2
skin
COSMIC
DSGSQS
DEG_SCF_TRCP1_1
0.7568
Drug responses associated with CHD2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of DSGSQS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O14647
Chromodomain-helicase-DNA-binding protein 2
DEG_SCF_TRCP1_1
32:37
DSGSQS
BTRC
0.9609
More...
Q76N89
E3 ubiquitin-protein ligase HECW1
DEG_SCF_TRCP1_1
900:905
DSGSQS
BTRC
0.9594
More...