DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
DSGTPS
Uniprot ID:
Q02880
Source protein:
DNA topoisomerase 2-beta
Source gene:
TOP2B
Class:
DEG_SCF_TRCP1_1
Location:
1134:1139
E3 ligase:
BTRC
DEGRON score:
0.9116
ASA_SCORE:
84.95
COIL:
0.9485
CONS_SCORE:
0.216
DSS_SCORE:
0.6941
HELIX:
0.0175
FCONS_SCORE:
0.7034
RIG_SCORE:
0.5115
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P1133L
TCGA-ER-A19P
SKCM
TCGA
DSGTPS
DEG_SCF_TRCP1_1
0.75
p.P1133L
DO47623
SKCM
ICGC
DSGTPS
DEG_SCF_TRCP1_1
0.75
p.D1137Y
TCGA-VQ-A8P2
STAD
TCGA
DSGTPS
DEG_SCF_TRCP1_1
0.7325
p.D1137Y
DO51761
STAD
ICGC
DSGTPS
DEG_SCF_TRCP1_1
0.7325
Drug responses associated with TOP2B mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of DSGTPS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q02880
DNA topoisomerase 2-beta
DEG_SCF_TRCP1_1
1134:1139
DSGTPS
BTRC
0.9116
More...
Q6V0I7
Protocadherin Fat 4
DEG_SCF_TRCP1_1
3484:3489
DSGTPS
BTRC
0.6812
More...