DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
DSGVDLS
Uniprot ID:
P48634
Source protein:
Protein PRRC2A
Source gene:
PRRC2A
Class:
DEG_SCF_TRCP1_1
Location:
1650:1656
E3 ligase:
BTRC
DEGRON score:
0.9787
ASA_SCORE:
78.1714
COIL:
0.9126
CONS_SCORE:
0.5878
DSS_SCORE:
0.7238
HELIX:
0.0509
FCONS_SCORE:
0.9986
RIG_SCORE:
0.6328
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E1645Q
TCGA-GV-A3JX
BLCA
TCGA
DSGVDLS
DEG_SCF_TRCP1_1
0.1944
p.E1645Q
DO448
BLCA
ICGC
DSGVDLS
DEG_SCF_TRCP1_1
0.1944
p.G1664D
DO232761
PBCA
ICGC
DSGVDLS
DEG_SCF_TRCP1_1
0.1111
p.S1651G
DO229181
THCA
ICGC
DSGVDLS
DEG_SCF_TRCP1_1
0.6993
Drug responses associated with PRRC2A mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of DSGVDLS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P48634
Protein PRRC2A
DEG_SCF_TRCP1_1
1650:1656
DSGVDLS
BTRC
0.9787
More...
Q5JSZ5
Protein PRRC2B
DEG_SCF_TRCP1_1
1670:1676
DSGVDLS
BTRC
0.9995
More...