DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
DSGVDLS
Uniprot ID:
Q5JSZ5
Source protein:
Protein PRRC2B
Source gene:
PRRC2B
Class:
DEG_SCF_TRCP1_1
Location:
1670:1676
E3 ligase:
BTRC
DEGRON score:
0.9995
ASA_SCORE:
75.5
COIL:
0.8317
CONS_SCORE:
1
DSS_SCORE:
0.6435
HELIX:
0.1203
FCONS_SCORE:
1.064
RIG_SCORE:
0.6307
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S1679Y
TCGA-5C-A9VG
LIHC
TCGA
DSGVDLS
DEG_SCF_TRCP1_1
0.6944
p.E1678K
TCGA-AP-A056
UCEC
TCGA
DSGVDLS
DEG_SCF_TRCP1_1
0.2778
p.R1680Q
TCGA-BR-4362
STAD
TCGA
DSGVDLS
DEG_SCF_TRCP1_1
0.2222
p.R1680Q
TCGA-BR-6566
STAD
TCGA
DSGVDLS
DEG_SCF_TRCP1_1
0.2222
p.R1680Q
TCGA-GS-A9TU
DLBC
TCGA
DSGVDLS
DEG_SCF_TRCP1_1
0.2222
p.E1678D
TCGA-BR-7851
STAD
TCGA
DSGVDLS
DEG_SCF_TRCP1_1
0.2778
p.S1676I
TCGA-RC-A6M3
LIHC
TCGA
DSGVDLS
DEG_SCF_TRCP1_1
0.8453
p.S1683P
SIDM00781
Colorectal Carcinoma
GDSC
DSGVDLS
DEG_SCF_TRCP1_1
0.1389
p.S1683P
SIDM00780
Colorectal Carcinoma
GDSC
DSGVDLS
DEG_SCF_TRCP1_1
0.1389
p.S1683P
SNU-C2B
large_intestine
COSMIC
DSGVDLS
DEG_SCF_TRCP1_1
0.1389
p.E1681G
SIDM01045
Endometrial Carcinoma
GDSC
DSGVDLS
DEG_SCF_TRCP1_1
0.1944
p.E1681G
EN
endometrium
COSMIC
DSGVDLS
DEG_SCF_TRCP1_1
0.1944
Drug responses associated with PRRC2B mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of DSGVDLS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P48634
Protein PRRC2A
DEG_SCF_TRCP1_1
1650:1656
DSGVDLS
BTRC
0.9787
More...
Q5JSZ5
Protein PRRC2B
DEG_SCF_TRCP1_1
1670:1676
DSGVDLS
BTRC
0.9995
More...