DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CGC
Degron:
DSGVNS
Uniprot ID:
Q6V1P9
Source protein:
Protocadherin-23
Source gene:
DCHS2
Class:
DEG_SCF_TRCP1_1
Location:
1752:1757
E3 ligase:
BTRC
DEGRON score:
0.5913
ASA_SCORE:
57.2333
COIL:
0.8017
CONS_SCORE:
0.2806
DSS_SCORE:
0.314
HELIX:
0.0558
FCONS_SCORE:
0.7588
RIG_SCORE:
0.7337
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.F1750I
TCGA-06-5416
GBM
TCGA
DSGVNS
DEG_SCF_TRCP1_1
0.2778
p.F1750I
DO10880
GBM
ICGC
DSGVNS
DEG_SCF_TRCP1_1
0.2778
p.L1748I
TCGA-17-Z001
LUAD
TCGA
DSGVNS
DEG_SCF_TRCP1_1
0.2222
p.L1748P
TCGA-17-Z031
LUAD
TCGA
DSGVNS
DEG_SCF_TRCP1_1
0.2222
p.L1761F
TCGA-38-4629
LUAD
TCGA
DSGVNS
DEG_SCF_TRCP1_1
0.2222
p.L1761F
DO23771
LUAD
ICGC
DSGVNS
DEG_SCF_TRCP1_1
0.2222
p.V1760I
TCGA-VQ-A8P2
STAD
TCGA
DSGVNS
DEG_SCF_TRCP1_1
0.25
p.V1760I
TCGA-WS-AB45
COAD
TCGA
DSGVNS
DEG_SCF_TRCP1_1
0.25
p.V1760I
DO51734
COAD
ICGC
DSGVNS
DEG_SCF_TRCP1_1
0.25
p.V1760I
DO51761
STAD
ICGC
DSGVNS
DEG_SCF_TRCP1_1
0.25
p.S1764R
TCGA-VQ-A91V
STAD
TCGA
DSGVNS
DEG_SCF_TRCP1_1
0.1389
p.S1764R
DO222356
STAD
ICGC
DSGVNS
DEG_SCF_TRCP1_1
0.1389
p.K1746T
TCGA-VQ-A925
STAD
TCGA
DSGVNS
DEG_SCF_TRCP1_1
0.1667
p.K1746T
DO234462
ESAD
ICGC
DSGVNS
DEG_SCF_TRCP1_1
0.1667
p.K1746T
DO233736
GACA
ICGC
DSGVNS
DEG_SCF_TRCP1_1
0.1667
p.K1746T
DO51796
STAD
ICGC
DSGVNS
DEG_SCF_TRCP1_1
0.1667
p.D1749H
TCGA-VR-A8EX
ESCA
TCGA
DSGVNS
DEG_SCF_TRCP1_1
0.25
p.K1746R
DO50452
ESAD
ICGC
DSGVNS
DEG_SCF_TRCP1_1
0.1667
p.K1746R
DO234453
ESAD
ICGC
DSGVNS
DEG_SCF_TRCP1_1
0.1667
p.K1746R
DO228305
MALY
ICGC
DSGVNS
DEG_SCF_TRCP1_1
0.1667
p.K1746M
DO234204
ESAD
ICGC
DSGVNS
DEG_SCF_TRCP1_1
0.1667
p.E1763D
DO233124
GACA
ICGC
DSGVNS
DEG_SCF_TRCP1_1
0.1667
p.E1744V
DO50835
LICA
ICGC
DSGVNS
DEG_SCF_TRCP1_1
0.1111
p.Q1760R
SIDM01451
Pancreatic Carcinoma
GDSC
DSGVNS
DEG_SCF_TRCP1_1
0.25
p.Q1757R
ACH-000996
Endometrial/Uterine Cancer
CCLE
DSGVNS
DEG_SCF_TRCP1_1
0.7329
Drug responses associated with DCHS2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of DSGVNS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q96JQ0
Protocadherin-16
DEG_SCF_TRCP1_1
922:927
DSGVNS
BTRC
0.946
More...
Q6V1P9
Protocadherin-23
DEG_SCF_TRCP1_1
1752:1757
DSGVNS
BTRC
0.5913
More...