DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
DSGVNS
Uniprot ID:
Q96JQ0
Source protein:
Protocadherin-16
Source gene:
DCHS1
Class:
DEG_SCF_TRCP1_1
Location:
922:927
E3 ligase:
BTRC
DEGRON score:
0.946
ASA_SCORE:
54.65
COIL:
0.8592
CONS_SCORE:
0.5318
DSS_SCORE:
0.2814
HELIX:
0.043
FCONS_SCORE:
1.0066
RIG_SCORE:
0.7297
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R928Q
TCGA-A5-A1OF
UCEC
TCGA
DSGVNS
DEG_SCF_TRCP1_1
0.3056
p.R928Q
DO42568
UCEC
ICGC
DSGVNS
DEG_SCF_TRCP1_1
0.3056
p.R917Q
TCGA-CM-4743
COAD
TCGA
DSGVNS
DEG_SCF_TRCP1_1
0.1944
p.R917Q
DO8103
COAD
ICGC
DSGVNS
DEG_SCF_TRCP1_1
0.1944
p.V925I
DO224713
BRCA
ICGC
DSGVNS
DEG_SCF_TRCP1_1
0.5965
p.L919F
DO222434
MELA
ICGC
DSGVNS
DEG_SCF_TRCP1_1
0.25
p.R917W
SIDM01307
Colorectal Carcinoma
GDSC
DSGVNS
DEG_SCF_TRCP1_1
0.1944
Drug responses associated with DCHS1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of DSGVNS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q96JQ0
Protocadherin-16
DEG_SCF_TRCP1_1
922:927
DSGVNS
BTRC
0.946
More...
Q6V1P9
Protocadherin-23
DEG_SCF_TRCP1_1
1752:1757
DSGVNS
BTRC
0.5913
More...