DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
DSGVQT
Uniprot ID:
Q9Y6V0
Source protein:
Protein piccolo
Source gene:
PCLO
Class:
DEG_SCF_TRCP1_1
Location:
3442:3447
E3 ligase:
BTRC
DEGRON score:
0.9648
ASA_SCORE:
68.1167
COIL:
0.7478
CONS_SCORE:
0.4347
DSS_SCORE:
0.5601
HELIX:
0.0552
FCONS_SCORE:
0.8973
RIG_SCORE:
0.6858
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S3456R
TCGA-05-4427
LUAD
TCGA
DSGVQT
DEG_SCF_TRCP1_1
0.0833
p.R3455Q
TCGA-18-3414
LUSC
TCGA
DSGVQT
DEG_SCF_TRCP1_1
0.1111
p.T3447M
TCGA-49-4505
LUAD
TCGA
DSGVQT
DEG_SCF_TRCP1_1
0.7423
p.T3447M
TCGA-HF-7132
STAD
TCGA
DSGVQT
DEG_SCF_TRCP1_1
0.7423
p.D3449N
TCGA-AA-A01T
COAD
TCGA
DSGVQT
DEG_SCF_TRCP1_1
0.2778
p.Q3446R
TCGA-AK-3456
KIRC
TCGA
DSGVQT
DEG_SCF_TRCP1_1
0.6218
p.R3435Q
TCGA-AP-A1DV
UCEC
TCGA
DSGVQT
DEG_SCF_TRCP1_1
0.1389
p.R3435Q
TCGA-CA-6718
COAD
TCGA
DSGVQT
DEG_SCF_TRCP1_1
0.1389
p.R3435Q
TCGA-ER-A198
SKCM
TCGA
DSGVQT
DEG_SCF_TRCP1_1
0.1389
p.R3435Q
TCGA-IG-A51D
ESCA
TCGA
DSGVQT
DEG_SCF_TRCP1_1
0.1389
p.T3453A
TCGA-B5-A3FA
UCEC
TCGA
DSGVQT
DEG_SCF_TRCP1_1
0.1667
p.D3451Y
TCGA-BS-A0UF
UCEC
TCGA
DSGVQT
DEG_SCF_TRCP1_1
0.2222
p.R3455W
TCGA-D3-A8GI
SKCM
TCGA
DSGVQT
DEG_SCF_TRCP1_1
0.1111
p.E3450K
TCGA-FW-A3R5
SKCM
TCGA
DSGVQT
DEG_SCF_TRCP1_1
0.25
p.D3432N
SIDM00433
T-Lymphoblastic Leukemia
GDSC
DSGVQT
DEG_SCF_TRCP1_1
0.0556
p.D3432N
SIDM01483
Melanoma
GDSC
DSGVQT
DEG_SCF_TRCP1_1
0.0556
p.D3432N
SIDM01149
Small Cell Lung Carcinoma
GDSC
DSGVQT
DEG_SCF_TRCP1_1
0.0556
p.D3454Y
SIDM00789
Colorectal Carcinoma
GDSC
DSGVQT
DEG_SCF_TRCP1_1
0.1389
p.D3454Y
HCT-15
large_intestine
COSMIC
DSGVQT
DEG_SCF_TRCP1_1
0.1389
p.S3436N
SIDM00567
Other Solid Cancers
GDSC
DSGVQT
DEG_SCF_TRCP1_1
0.1667
p.S3436N
ACH-000776
Brain Cancer
CCLE
DSGVQT
DEG_SCF_TRCP1_1
0.1667
p.S3436N
ONS-76
central_nervous_system
COSMIC
DSGVQT
DEG_SCF_TRCP1_1
0.1667
p.D3449E
SIDM01205
Acute Myeloid Leukemia
GDSC
DSGVQT
DEG_SCF_TRCP1_1
0.2778
p.D3449E
SIDM01195
Acute Myeloid Leukemia
GDSC
DSGVQT
DEG_SCF_TRCP1_1
0.2778
p.D3449E
ACH-000406
Leukemia
CCLE
DSGVQT
DEG_SCF_TRCP1_1
0.2778
p.D3449E
ACH-002314
Leukemia
CCLE
DSGVQT
DEG_SCF_TRCP1_1
0.2778
p.D3449E
TUR
haematopoietic_and_lymphoid_tissue
COSMIC
DSGVQT
DEG_SCF_TRCP1_1
0.2778
Drug responses associated with PCLO mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of DSGVQT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q96RD6
Pannexin-2
DEG_SCF_TRCP1_1
399:404
DSGVQT
BTRC
0.9965
More...
Q9Y6V0
Protein piccolo
DEG_SCF_TRCP1_1
3442:3447
DSGVQT
BTRC
0.9648
More...