DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
FDPFAD
Uniprot ID:
O60739
Source protein:
Eukaryotic translation initiation factor 1b
Source gene:
EIF1B
Class:
LIG_APCC_ABBA_1
Location:
10:15
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.995
ASA_SCORE:
54.65
COIL:
0.736
CONS_SCORE:
0.6557
DSS_SCORE:
0.425
HELIX:
0.2013
FCONS_SCORE:
1.627
RIG_SCORE:
0.7665
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A14V
TCGA-A5-A1OF
UCEC
TCGA
FDPFAD
LIG_APCC_ABBA_1
0.5825
p.A14V
DO42568
UCEC
ICGC
FDPFAD
LIG_APCC_ABBA_1
0.5825
p.S9Y
TCGA-AJ-A5DW
UCEC
TCGA
FDPFAD
LIG_APCC_ABBA_1
0.75
p.S9Y
DO50075
UCEC
ICGC
FDPFAD
LIG_APCC_ABBA_1
0.75
p.P24S
TCGA-EE-A29N
SKCM
TCGA
FDPFAD
LIG_APCC_ABBA_1
0.0833
p.P24S
DO38001
SKCM
ICGC
FDPFAD
LIG_APCC_ABBA_1
0.0833
p.D11Y
TCGA-ER-A19B
SKCM
TCGA
FDPFAD
LIG_APCC_ABBA_1
0.6214
p.D11Y
DO47491
SKCM
ICGC
FDPFAD
LIG_APCC_ABBA_1
0.6214
p.K18N
TCGA-MN-A4N4
LUAD
TCGA
FDPFAD
LIG_APCC_ABBA_1
0.6944
p.K18N
DO26250
LUAD
ICGC
FDPFAD
LIG_APCC_ABBA_1
0.6944
p.D20E
TCGA-V4-A9EM
UVM
TCGA
FDPFAD
LIG_APCC_ABBA_1
0.1944
p.P12L
DO233652
GACA
ICGC
FDPFAD
LIG_APCC_ABBA_1
0.6471
p.D11N
SIDM00789
Colorectal Carcinoma
GDSC
FDPFAD
LIG_APCC_ABBA_1
0.5821
p.D11N
HCT-15
large_intestine
COSMIC
FDPFAD
LIG_APCC_ABBA_1
0.5821
p.D15N
ACH-000472
Head and Neck Cancer
CCLE
FDPFAD
LIG_APCC_ABBA_1
0.6932
Drug responses associated with EIF1B mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of FDPFAD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P41567
Eukaryotic translation initiation factor 1
LIG_APCC_ABBA_1
10:15
FDPFAD
APC,CDC20,FZR1
0.9992
More...
O60739
Eukaryotic translation initiation factor 1b
LIG_APCC_ABBA_1
10:15
FDPFAD
APC,CDC20,FZR1
0.995
More...