DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
FKENQ
Uniprot ID:
Q86YC2
Source protein:
Partner and localizer of BRCA2
Source gene:
PALB2
Class:
DEG_APCC_KENBOX_2
Location:
818:822
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.7398
ASA_SCORE:
107.68
COIL:
0.5038
CONS_SCORE:
0.4715
DSS_SCORE:
0.4213
HELIX:
0.4768
FCONS_SCORE:
1.0229
RIG_SCORE:
0.791
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E820Q
TCGA-43-A56V
LUSC
TCGA
FKENQ
DEG_APCC_KENBOX_2
0.6744
p.E820Q
DO45535
LUSC
ICGC
FKENQ
DEG_APCC_KENBOX_2
0.6744
p.P812S
TCGA-EB-A41A
SKCM
TCGA
FKENQ
DEG_APCC_KENBOX_2
0.1667
p.P812S
DO37429
SKCM
ICGC
FKENQ
DEG_APCC_KENBOX_2
0.1667
p.C828F
TCGA-F7-7848
HNSC
TCGA
FKENQ
DEG_APCC_KENBOX_2
0.1667
p.C828F
DO14198
HNSC
ICGC
FKENQ
DEG_APCC_KENBOX_2
0.1667
p.P812L
DO222572
MELA
ICGC
FKENQ
DEG_APCC_KENBOX_2
0.1667
p.V828M
22RV1
prostate
COSMIC
FKENQ
DEG_APCC_KENBOX_2
0.1667
Drug responses associated with PALB2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of FKENQ
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q5TB80
Centrosomal protein of 162 kDa
DEG_APCC_KENBOX_2
746:750
FKENQ
APC,CDC20,FZR1
0.6036
More...
Q86YC2
Partner and localizer of BRCA2
DEG_APCC_KENBOX_2
818:822
FKENQ
APC,CDC20,FZR1
0.7398
More...