DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
GKENA
Uniprot ID:
Q6RFH5
Source protein:
WD repeat-containing protein 74
Source gene:
WDR74
Class:
DEG_APCC_KENBOX_2
Location:
150:154
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9593
ASA_SCORE:
44.04
COIL:
0.7074
CONS_SCORE:
0.753
DSS_SCORE:
0.3506
HELIX:
0.0066
FCONS_SCORE:
1.1801
RIG_SCORE:
0.727
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.L160V
TCGA-05-4424
LUAD
TCGA
GKENA
DEG_APCC_KENBOX_2
0.1667
p.L160V
DO23672
LUAD
ICGC
GKENA
DEG_APCC_KENBOX_2
0.1667
p.P143S
TCGA-D3-A3C7
SKCM
TCGA
GKENA
DEG_APCC_KENBOX_2
0.1389
p.P143S
DO47569
SKCM
ICGC
GKENA
DEG_APCC_KENBOX_2
0.1389
p.W158L
TCGA-HE-7128
KIRP
TCGA
GKENA
DEG_APCC_KENBOX_2
0.2222
p.W158L
DO20796
KIRP
ICGC
GKENA
DEG_APCC_KENBOX_2
0.2222
p.P140Q
TCGA-HE-7130
KIRP
TCGA
GKENA
DEG_APCC_KENBOX_2
0.0556
p.P140Q
DO20776
KIRP
ICGC
GKENA
DEG_APCC_KENBOX_2
0.0556
p.V146D
SIDM00683
Prostate Carcinoma
GDSC
GKENA
DEG_APCC_KENBOX_2
0.2222
p.V146D
ACH-000977
lymph_node
CCLE
GKENA
DEG_APCC_KENBOX_2
0.2222
p.V146D
LNCaP-Clone-FGC
prostate
COSMIC
GKENA
DEG_APCC_KENBOX_2
0.2222
p.R160H
ACH-000200
Brain Cancer
CCLE
GKENA
DEG_APCC_KENBOX_2
0.1667
p.R160H
ACH-000919
Gastric Cancer
CCLE
GKENA
DEG_APCC_KENBOX_2
0.1667
p.R160H
NMC-G1
central_nervous_system
COSMIC
GKENA
DEG_APCC_KENBOX_2
0.1667
p.R160H
IM-95
stomach
COSMIC
GKENA
DEG_APCC_KENBOX_2
0.1667
p.K140E
ACH-000952
Prostate Cancer
CCLE
GKENA
DEG_APCC_KENBOX_2
0.0556
p.R160C
GP5d
large_intestine
COSMIC
GKENA
DEG_APCC_KENBOX_2
0.1667
Drug responses associated with WDR74 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of GKENA
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q6RFH5
WD repeat-containing protein 74
DEG_APCC_KENBOX_2
150:154
GKENA
APC,CDC20,FZR1
0.9593
More...
Q9HCM7
Fibrosin-1-like protein
DEG_APCC_KENBOX_2
43:47
GKENA
APC,CDC20,FZR1
0.9859
More...