DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
GKENM
Uniprot ID:
Q9NXL2
Source protein:
Rho guanine nucleotide exchange factor 38
Source gene:
ARHGEF38
Class:
DEG_APCC_KENBOX_2
Location:
8:12
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9385
ASA_SCORE:
107.06
COIL:
0.6476
CONS_SCORE:
0.7527
DSS_SCORE:
0.5944
HELIX:
0.3322
FCONS_SCORE:
0.9864
RIG_SCORE:
0.7111
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A20V
TCGA-05-4397
LUAD
TCGA
GKENM
DEG_APCC_KENBOX_2
0.1111
p.A20V
DO25320
LUAD
ICGC
GKENM
DEG_APCC_KENBOX_2
0.1111
p.K17N
TCGA-AA-3510
COAD
TCGA
GKENM
DEG_APCC_KENBOX_2
0.3056
p.K17N
DO7783
COAD
ICGC
GKENM
DEG_APCC_KENBOX_2
0.3056
p.M12I
TCGA-CN-6010
HNSC
TCGA
GKENM
DEG_APCC_KENBOX_2
0.6507
p.M12I
DO14766
HNSC
ICGC
GKENM
DEG_APCC_KENBOX_2
0.6507
p.E2K
SIDM00955
Melanoma
GDSC
GKENM
DEG_APCC_KENBOX_2
0.1667
p.E2K
ACH-000812
Skin Cancer
CCLE
GKENM
DEG_APCC_KENBOX_2
0.1667
p.E2K
COLO-783
skin
COSMIC
GKENM
DEG_APCC_KENBOX_2
0.1667
p.F21L
SIDM01090
Colorectal Carcinoma
GDSC
GKENM
DEG_APCC_KENBOX_2
0.0833
p.F21L
SIDM01116
Non-Small Cell Lung Carcinoma
GDSC
GKENM
DEG_APCC_KENBOX_2
0.0833
p.F21L
SIDM00650
Small Cell Lung Carcinoma
GDSC
GKENM
DEG_APCC_KENBOX_2
0.0833
p.F21L
SIDM01681
Non-Cancerous
GDSC
GKENM
DEG_APCC_KENBOX_2
0.0833
p.F21L
SIDM00808
Burkitt's Lymphoma
GDSC
GKENM
DEG_APCC_KENBOX_2
0.0833
p.F21L
SIDM01710
Squamous Cell Lung Carcinoma
GDSC
GKENM
DEG_APCC_KENBOX_2
0.0833
p.F21L
SIDM01254
Burkitt's Lymphoma
GDSC
GKENM
DEG_APCC_KENBOX_2
0.0833
Drug responses associated with ARHGEF38 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of GKENM
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9BRS8
La-related protein 6
DEG_APCC_KENBOX_2
282:286
GKENM
APC,CDC20,FZR1
0.9927
More...
Q9NXL2
Rho guanine nucleotide exchange factor 38
DEG_APCC_KENBOX_2
8:12
GKENM
APC,CDC20,FZR1
0.9385
More...