DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
GMR
Uniprot ID:
Q96L96
Source protein:
Alpha-protein kinase 3
Source gene:
ALPK3
Class:
DEG_APCC_TPR_1
Location:
1905:1907
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9603
ASA_SCORE:
130.6333
COIL:
0.9133
CONS_SCORE:
0.4133
DSS_SCORE:
0.9869
HELIX:
0.0853
FCONS_SCORE:
1.1128
RIG_SCORE:
0.6437
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R1907W
TCGA-AX-A1CE
UCEC
TCGA
GMR
DEG_APCC_TPR_1
0.8634
p.R1907W
DO42280
UCEC
ICGC
GMR
DEG_APCC_TPR_1
0.8634
p.R1907W
ACH-001518
Endometrial/Uterine Cancer
CCLE
GMR
DEG_APCC_TPR_1
0.8634
p.Q1904K
TCGA-E8-A2EA
THCA
TCGA
GMR
DEG_APCC_TPR_1
0.3056
p.Q1904K
DO38926
THCA
ICGC
GMR
DEG_APCC_TPR_1
0.3056
p.G1905S
TCGA-FS-A1ZW
SKCM
TCGA
GMR
DEG_APCC_TPR_1
0.5882
p.G1905S
DO37519
SKCM
ICGC
GMR
DEG_APCC_TPR_1
0.5882
p.K1902N
TCGA-XP-A8T8
ESCA
TCGA
GMR
DEG_APCC_TPR_1
0.3611
p.G1905V
DO229026
LICA
ICGC
GMR
DEG_APCC_TPR_1
0.6421
p.K1902R
DO232832
NACA
ICGC
GMR
DEG_APCC_TPR_1
0.3611
p.S1901F
ACH-001395
Breast Cancer
CCLE
GMR
DEG_APCC_TPR_1
0.2222
Drug responses associated with ALPK3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of GMR
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P51955
Serine/threonine-protein kinase Nek2
DEG_APCC_TPR_1
443:445
GMR
APC,CDC20,FZR1
0.9984
More...
Q96L96
Alpha-protein kinase 3
DEG_APCC_TPR_1
1905:1907
GMR
APC,CDC20,FZR1
0.9603
More...