DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
GRLRLPQIG
Uniprot ID:
P35125
Source protein:
Ubiquitin carboxyl-terminal hydrolase 6
Source gene:
USP6
Class:
DEG_APCC_DBOX_1
Location:
1205:1213
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.6488
ASA_SCORE:
93.1889
COIL:
0.8178
CONS_SCORE:
0.2577
DSS_SCORE:
0.794
HELIX:
0.0424
FCONS_SCORE:
1.0124
RIG_SCORE:
0.6526
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.K1223N
TCGA-AP-A056
UCEC
TCGA
GRLRLPQIG
DEG_APCC_DBOX_1
0.1667
p.K1223N
TCGA-AX-A05Z
UCEC
TCGA
GRLRLPQIG
DEG_APCC_DBOX_1
0.1667
p.K1223N
DO40884
UCEC
ICGC
GRLRLPQIG
DEG_APCC_DBOX_1
0.1667
p.K1223N
DO43971
UCEC
ICGC
GRLRLPQIG
DEG_APCC_DBOX_1
0.1667
p.G1201W
TCGA-BR-6456
STAD
TCGA
GRLRLPQIG
DEG_APCC_DBOX_1
0.2222
p.G1201W
DO38655
STAD
ICGC
GRLRLPQIG
DEG_APCC_DBOX_1
0.2222
p.S1195I
TCGA-BS-A0UF
UCEC
TCGA
GRLRLPQIG
DEG_APCC_DBOX_1
0.0556
p.S1195I
DO41488
UCEC
ICGC
GRLRLPQIG
DEG_APCC_DBOX_1
0.0556
p.R1208W
TCGA-EE-A29D
SKCM
TCGA
GRLRLPQIG
DEG_APCC_DBOX_1
0.7523
p.R1208W
TCGA-FR-A726
SKCM
TCGA
GRLRLPQIG
DEG_APCC_DBOX_1
0.7523
p.R1208W
DO48665
SKCM
ICGC
GRLRLPQIG
DEG_APCC_DBOX_1
0.7523
p.R1208W
DO38123
SKCM
ICGC
GRLRLPQIG
DEG_APCC_DBOX_1
0.7523
p.R1198L
TCGA-IN-A6RL
STAD
TCGA
GRLRLPQIG
DEG_APCC_DBOX_1
0.1389
p.R1198L
DO51738
STAD
ICGC
GRLRLPQIG
DEG_APCC_DBOX_1
0.1389
p.T1199I
SIDM01265
Plasma Cell Myeloma
GDSC
GRLRLPQIG
DEG_APCC_DBOX_1
0.6111
p.T1199I
SIDM01245
T-Lymphoblastic Leukemia
GDSC
GRLRLPQIG
DEG_APCC_DBOX_1
0.6111
p.T1199I
SIDM00099
Mesothelioma
GDSC
GRLRLPQIG
DEG_APCC_DBOX_1
0.6111
p.T1199I
SIDM00203
Ewing's Sarcoma
GDSC
GRLRLPQIG
DEG_APCC_DBOX_1
0.6111
p.T1199I
SIDM00094
Kidney Carcinoma
GDSC
GRLRLPQIG
DEG_APCC_DBOX_1
0.6111
p.T1199I
SIDM00991
T-Lymphoblastic Leukemia
GDSC
GRLRLPQIG
DEG_APCC_DBOX_1
0.6111
p.R1202G
SIDM00774
Breast Carcinoma
GDSC
GRLRLPQIG
DEG_APCC_DBOX_1
0.25
p.R1202G
ACH-000691
Breast Cancer
CCLE
GRLRLPQIG
DEG_APCC_DBOX_1
0.25
p.R1202G
HCC2157
breast
COSMIC
GRLRLPQIG
DEG_APCC_DBOX_1
0.25
p.R1198Q
SIDM01105
Melanoma
GDSC
GRLRLPQIG
DEG_APCC_DBOX_1
0.1389
p.R1198Q
ACH-000423
Skin Cancer
CCLE
GRLRLPQIG
DEG_APCC_DBOX_1
0.1389
p.R1198Q
SK-MEL-3
skin
COSMIC
GRLRLPQIG
DEG_APCC_DBOX_1
0.1389
Drug responses associated with USP6 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of GRLRLPQIG
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P35125
Ubiquitin carboxyl-terminal hydrolase 6
DEG_APCC_DBOX_1
1205:1213
GRLRLPQIG
APC,CDC20,FZR1
0.6488
More...
Q8NFA0
Ubiquitin carboxyl-terminal hydrolase 32
DEG_APCC_DBOX_1
1407:1415
GRLRLPQIG
APC,CDC20,FZR1
0.6457
More...