DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
GRLRLPQIG
Uniprot ID:
Q8NFA0
Source protein:
Ubiquitin carboxyl-terminal hydrolase 32
Source gene:
USP32
Class:
DEG_APCC_DBOX_1
Location:
1407:1415
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.6457
ASA_SCORE:
90.0556
COIL:
0.7711
CONS_SCORE:
0.2508
DSS_SCORE:
0.7018
HELIX:
0.0718
FCONS_SCORE:
0.9771
RIG_SCORE:
0.6739
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S1405C
TCGA-AY-6196
COAD
TCGA
GRLRLPQIG
DEG_APCC_DBOX_1
0.2778
p.S1405C
DO10300
COAD
ICGC
GRLRLPQIG
DEG_APCC_DBOX_1
0.2778
p.G1407W
DO225337
BRCA
ICGC
GRLRLPQIG
DEG_APCC_DBOX_1
0.6714
p.G1407W
DO233688
GACA
ICGC
GRLRLPQIG
DEG_APCC_DBOX_1
0.6714
p.R1400Q
DO222837
MELA
ICGC
GRLRLPQIG
DEG_APCC_DBOX_1
0.1389
p.R1410L
SIDM00775
Non-Small Cell Lung Carcinoma
GDSC
GRLRLPQIG
DEG_APCC_DBOX_1
0.7316
p.R1410L
ACH-000785
Lung Cancer
CCLE
GRLRLPQIG
DEG_APCC_DBOX_1
0.7316
p.R1410L
NCI-H2126
lung
COSMIC
GRLRLPQIG
DEG_APCC_DBOX_1
0.7316
p.G1415A
SIDM00699
Small Cell Lung Carcinoma
GDSC
GRLRLPQIG
DEG_APCC_DBOX_1
0.6429
p.G1415A
ACH-001138
Lung Cancer
CCLE
GRLRLPQIG
DEG_APCC_DBOX_1
0.6429
p.G1415A
NCI-H2141
lung
COSMIC
GRLRLPQIG
DEG_APCC_DBOX_1
0.6429
Drug responses associated with USP32 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of GRLRLPQIG
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P35125
Ubiquitin carboxyl-terminal hydrolase 6
DEG_APCC_DBOX_1
1205:1213
GRLRLPQIG
APC,CDC20,FZR1
0.6488
More...
Q8NFA0
Ubiquitin carboxyl-terminal hydrolase 32
DEG_APCC_DBOX_1
1407:1415
GRLRLPQIG
APC,CDC20,FZR1
0.6457
More...