DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
IRVYPE
Uniprot ID:
Q13242
Source protein:
Serine/arginine-rich splicing factor 9
Source gene:
SRSF9
Class:
LIG_APCC_ABBA_1
Location:
180:185
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9776
ASA_SCORE:
79.3833
COIL:
0.5658
CONS_SCORE:
0.4937
DSS_SCORE:
0.4544
HELIX:
0.0243
FCONS_SCORE:
0.9999
RIG_SCORE:
0.7902
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E174K
DO223015
ESCA
ICGC
IRVYPE
LIG_APCC_ABBA_1
0.1667
p.P184T
DO229038
LICA
ICGC
IRVYPE
LIG_APCC_ABBA_1
0.5919
p.S189I
DO229257
THCA
ICGC
IRVYPE
LIG_APCC_ABBA_1
0.6667
p.T177N
SIDM01007
T-Lymphoblastic Leukemia
GDSC
IRVYPE
LIG_APCC_ABBA_1
0.25
p.T177N
ACH-002256
Leukemia
CCLE
IRVYPE
LIG_APCC_ABBA_1
0.25
p.T177N
KARPAS-45
haematopoietic_and_lymphoid_tissue
COSMIC
IRVYPE
LIG_APCC_ABBA_1
0.25
p.T188S
SIDM00814
Other Solid Cancers
GDSC
IRVYPE
LIG_APCC_ABBA_1
0.6944
p.T188S
ACH-001401
Adrenal Cancer
CCLE
IRVYPE
LIG_APCC_ABBA_1
0.6944
p.T188S
SW13
adrenal_gland
COSMIC
IRVYPE
LIG_APCC_ABBA_1
0.6944
p.E176K
SIDM00999
Bladder Carcinoma
GDSC
IRVYPE
LIG_APCC_ABBA_1
0.2222
p.E176K
ACH-000973
Bladder Cancer
CCLE
IRVYPE
LIG_APCC_ABBA_1
0.2222
p.E176K
639-V
urinary_tract
COSMIC
IRVYPE
LIG_APCC_ABBA_1
0.2222
p.T177I
SIDM00867
Glioblastoma
GDSC
IRVYPE
LIG_APCC_ABBA_1
0.25
p.T177I
ACH-000863
Brain Cancer
CCLE
IRVYPE
LIG_APCC_ABBA_1
0.25
p.T177I
DBTRG-05MG
central_nervous_system
COSMIC
IRVYPE
LIG_APCC_ABBA_1
0.25
Drug responses associated with SRSF9 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of IRVYPE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q13242
Serine/arginine-rich splicing factor 9
LIG_APCC_ABBA_1
180:185
IRVYPE
APC,CDC20,FZR1
0.9776
More...
Q6MZW2
Follistatin-related protein 4
LIG_APCC_ABBA_1
343:348
IRVYPE
APC,CDC20,FZR1
0.7179
More...