DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
ISPFMD
Uniprot ID:
Q13370
Source protein:
cGMP-inhibited 3',5'-cyclic phosphodiesterase B
Source gene:
PDE3B
Class:
LIG_APCC_ABBA_1
Location:
973:978
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9865
ASA_SCORE:
44.6833
COIL:
0.787
CONS_SCORE:
0.6084
DSS_SCORE:
0.3816
HELIX:
0.0818
FCONS_SCORE:
1.0345
RIG_SCORE:
0.7717
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G970S
TCGA-22-5485
LUSC
TCGA
ISPFMD
LIG_APCC_ABBA_1
0.25
p.P972A
TCGA-3P-A9WA
OV
TCGA
ISPFMD
LIG_APCC_ABBA_1
0.3056
p.D964Y
TCGA-A5-A0G1
UCEC
TCGA
ISPFMD
LIG_APCC_ABBA_1
0.0833
p.D964Y
DO229029
LICA
ICGC
ISPFMD
LIG_APCC_ABBA_1
0.0833
p.D964Y
DO42472
UCEC
ICGC
ISPFMD
LIG_APCC_ABBA_1
0.0833
p.R979H
TCGA-AX-A1CE
UCEC
TCGA
ISPFMD
LIG_APCC_ABBA_1
0.3056
p.R979H
DO42280
UCEC
ICGC
ISPFMD
LIG_APCC_ABBA_1
0.3056
p.G963V
TCGA-D3-A2JP
SKCM
TCGA
ISPFMD
LIG_APCC_ABBA_1
0.0556
p.A967T
TCGA-F5-6814
READ
TCGA
ISPFMD
LIG_APCC_ABBA_1
0.1667
p.A967T
DO36556
READ
ICGC
ISPFMD
LIG_APCC_ABBA_1
0.1667
p.L969I
TCGA-F5-6814
READ
TCGA
ISPFMD
LIG_APCC_ABBA_1
0.2222
p.I973V
TCGA-FI-A2D5
UCEC
TCGA
ISPFMD
LIG_APCC_ABBA_1
0.5965
p.G979S
DO7828
COAD
ICGC
ISPFMD
LIG_APCC_ABBA_1
0.3056
p.G979S
DO234336
ESAD
ICGC
ISPFMD
LIG_APCC_ABBA_1
0.3056
p.L969V
SIDM01128
Small Cell Lung Carcinoma
GDSC
ISPFMD
LIG_APCC_ABBA_1
0.2222
p.L969V
NCI-H526
lung
COSMIC
ISPFMD
LIG_APCC_ABBA_1
0.2222
p.S980F
ACH-000842
Colon/Colorectal Cancer
CCLE
ISPFMD
LIG_APCC_ABBA_1
0.2778
p.D976N
ACH-000929
Lung Cancer
CCLE
ISPFMD
LIG_APCC_ABBA_1
0.6932
Drug responses associated with PDE3B mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of ISPFMD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q13370
cGMP-inhibited 3',5'-cyclic phosphodiesterase B
LIG_APCC_ABBA_1
973:978
ISPFMD
APC,CDC20,FZR1
0.9865
More...
Q14432
cGMP-inhibited 3',5'-cyclic phosphodiesterase A
LIG_APCC_ABBA_1
986:991
ISPFMD
APC,CDC20,FZR1
0.8601
More...