DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
ISPFMD
Uniprot ID:
Q14432
Source protein:
cGMP-inhibited 3',5'-cyclic phosphodiesterase A
Source gene:
PDE3A
Class:
LIG_APCC_ABBA_1
Location:
986:991
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8601
ASA_SCORE:
42.5
COIL:
0.7863
CONS_SCORE:
0.6325
DSS_SCORE:
0.3534
HELIX:
0.1198
FCONS_SCORE:
1.0367
RIG_SCORE:
0.7782
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.L1000I
TCGA-17-Z055
LUAD
TCGA
ISPFMD
LIG_APCC_ABBA_1
0.0833
p.R992C
TCGA-2W-A8YY
CESC
TCGA
ISPFMD
LIG_APCC_ABBA_1
0.3056
p.R992C
TCGA-EI-6917
READ
TCGA
ISPFMD
LIG_APCC_ABBA_1
0.3056
p.R992C
TCGA-FW-A3R5
SKCM
TCGA
ISPFMD
LIG_APCC_ABBA_1
0.3056
p.R992C
DO223732
CESC
ICGC
ISPFMD
LIG_APCC_ABBA_1
0.3056
p.R992C
DO36881
READ
ICGC
ISPFMD
LIG_APCC_ABBA_1
0.3056
p.R992C
DO37406
SKCM
ICGC
ISPFMD
LIG_APCC_ABBA_1
0.3056
p.E978D
TCGA-50-5930
LUAD
TCGA
ISPFMD
LIG_APCC_ABBA_1
0.1111
p.E978D
DO25189
LUAD
ICGC
ISPFMD
LIG_APCC_ABBA_1
0.1111
p.R992H
TCGA-AP-A1DV
UCEC
TCGA
ISPFMD
LIG_APCC_ABBA_1
0.3056
p.R992H
DO233732
GACA
ICGC
ISPFMD
LIG_APCC_ABBA_1
0.3056
p.R992H
DO43186
UCEC
ICGC
ISPFMD
LIG_APCC_ABBA_1
0.3056
p.G976A
TCGA-BA-4076
HNSC
TCGA
ISPFMD
LIG_APCC_ABBA_1
0.0556
p.A980D
TCGA-BR-4292
STAD
TCGA
ISPFMD
LIG_APCC_ABBA_1
0.1667
p.A980D
DO38495
STAD
ICGC
ISPFMD
LIG_APCC_ABBA_1
0.1667
p.Q1001H
TCGA-D8-A1JK
BRCA
TCGA
ISPFMD
LIG_APCC_ABBA_1
0.0556
p.Q1001H
DO3880
BRCA
ICGC
ISPFMD
LIG_APCC_ABBA_1
0.0556
p.D991Y
DO233253
GACA
ICGC
ISPFMD
LIG_APCC_ABBA_1
0.7325
p.M990I
DO233253
GACA
ICGC
ISPFMD
LIG_APCC_ABBA_1
0.6507
p.P995S
DO218884
SKCA
ICGC
ISPFMD
LIG_APCC_ABBA_1
0.2222
p.E979Q
SIDM02031
Esophageal Carcinoma
GDSC
ISPFMD
LIG_APCC_ABBA_1
0.1389
p.Q996L
SIDM00643
Non-Cancerous
GDSC
ISPFMD
LIG_APCC_ABBA_1
0.1944
p.Q996L
ACH-000327
Lung Cancer
CCLE
ISPFMD
LIG_APCC_ABBA_1
0.1944
p.Q996L
ACH-002363
Non-Cancerous
CCLE
ISPFMD
LIG_APCC_ABBA_1
0.1944
p.D977N
SIDM00006
Other Solid Cancers
GDSC
ISPFMD
LIG_APCC_ABBA_1
0.0833
p.D977N
ACH-001552
Skin Cancer
CCLE
ISPFMD
LIG_APCC_ABBA_1
0.0833
p.D977N
MCC26
skin
COSMIC
ISPFMD
LIG_APCC_ABBA_1
0.0833
p.S987N
SIDM00999
Bladder Carcinoma
GDSC
ISPFMD
LIG_APCC_ABBA_1
0.5958
p.S987N
ACH-000973
Bladder Cancer
CCLE
ISPFMD
LIG_APCC_ABBA_1
0.5958
p.S987N
639-V
urinary_tract
COSMIC
ISPFMD
LIG_APCC_ABBA_1
0.5958
Drug responses associated with PDE3A mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of ISPFMD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q13370
cGMP-inhibited 3',5'-cyclic phosphodiesterase B
LIG_APCC_ABBA_1
973:978
ISPFMD
APC,CDC20,FZR1
0.9865
More...
Q14432
cGMP-inhibited 3',5'-cyclic phosphodiesterase A
LIG_APCC_ABBA_1
986:991
ISPFMD
APC,CDC20,FZR1
0.8601
More...