DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
ITPGTE
Uniprot ID:
Q8IZH2
Source protein:
5'-3' exoribonuclease 1
Source gene:
XRN1
Class:
DEG_SCF_FBW7_2
Location:
133:138
E3 ligase:
FBXW7
DEGRON score:
0.7657
ASA_SCORE:
31.6833
COIL:
0.5113
CONS_SCORE:
0.5305
DSS_SCORE:
0.2755
HELIX:
0.3495
FCONS_SCORE:
1.2903
RIG_SCORE:
0.7771
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D129E
TCGA-AA-A010
COAD
TCGA
ITPGTE
DEG_SCF_FBW7_2
0.2222
p.A141T
TCGA-B5-A3FA
UCEC
TCGA
ITPGTE
DEG_SCF_FBW7_2
0.25
p.A141T
DO52402
UCEC
ICGC
ITPGTE
DEG_SCF_FBW7_2
0.25
p.C132Y
TCGA-J9-A8CN
PRAD
TCGA
ITPGTE
DEG_SCF_FBW7_2
0.3056
p.C132Y
DO219269
PRAD
ICGC
ITPGTE
DEG_SCF_FBW7_2
0.3056
p.E145K
DO217844
BRCA
ICGC
ITPGTE
DEG_SCF_FBW7_2
0.1389
p.D147Y
DO3110
BRCA
ICGC
ITPGTE
DEG_SCF_FBW7_2
0.0833
p.D147Y
DO50420
PRAD
ICGC
ITPGTE
DEG_SCF_FBW7_2
0.0833
p.P135Q
DO228948
LICA
ICGC
ITPGTE
DEG_SCF_FBW7_2
0.7035
p.A141D
DO229018
LICA
ICGC
ITPGTE
DEG_SCF_FBW7_2
0.25
p.P124H
DO229022
LICA
ICGC
ITPGTE
DEG_SCF_FBW7_2
0.0833
p.L130I
DO229032
LICA
ICGC
ITPGTE
DEG_SCF_FBW7_2
0.25
p.G136E
DO50970
LICA
ICGC
ITPGTE
DEG_SCF_FBW7_2
0.6087
p.R138W
DO220911
MELA
ICGC
ITPGTE
DEG_SCF_FBW7_2
0.8634
p.D135Y
DO229232
THCA
ICGC
ITPGTE
DEG_SCF_FBW7_2
0.7325
p.R125Q
DO40884
UCEC
ICGC
ITPGTE
DEG_SCF_FBW7_2
0.1111
p.K148T
SIDM01237
Hepatocellular Carcinoma
GDSC
ITPGTE
DEG_SCF_FBW7_2
0.1667
p.K148T
ACH-001021
Liver Cancer
CCLE
ITPGTE
DEG_SCF_FBW7_2
0.1667
p.K148T
C3A
liver
COSMIC
ITPGTE
DEG_SCF_FBW7_2
0.1667
p.D129Y
SIDM00681
Colorectal Carcinoma
GDSC
ITPGTE
DEG_SCF_FBW7_2
0.2222
p.D129Y
ACH-000252
Colon/Colorectal Cancer
CCLE
ITPGTE
DEG_SCF_FBW7_2
0.2222
p.D129Y
LS-1034
large_intestine
COSMIC
ITPGTE
DEG_SCF_FBW7_2
0.2222
Drug responses associated with XRN1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of ITPGTE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8IZH2
5'-3' exoribonuclease 1
DEG_SCF_FBW7_2
133:138
ITPGTE
FBXW7
0.7657
More...
Q9H0D6
5'-3' exoribonuclease 2
DEG_SCF_FBW7_2
160:165
ITPGTE
FBXW7
0.7839
More...