DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
KKENR
Uniprot ID:
O15417
Source protein:
Trinucleotide repeat-containing gene 18 protein
Source gene:
TNRC18
Class:
DEG_APCC_KENBOX_2
Location:
2098:2102
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.5707
ASA_SCORE:
130.62
COIL:
0.707
CONS_SCORE:
0.3446
DSS_SCORE:
0.6085
HELIX:
0.2478
FCONS_SCORE:
0.9659
RIG_SCORE:
0.6549
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G2105E
TCGA-12-3651
GBM
TCGA
KKENR
DEG_APCC_KENBOX_2
0.25
p.G2105E
DO13845
GBM
ICGC
KKENR
DEG_APCC_KENBOX_2
0.25
p.R2102C
TCGA-AX-A1C9
UCEC
TCGA
KKENR
DEG_APCC_KENBOX_2
0.719
p.R2102C
DO43098
UCEC
ICGC
KKENR
DEG_APCC_KENBOX_2
0.719
p.K2098N
TCGA-D1-A17F
UCEC
TCGA
KKENR
DEG_APCC_KENBOX_2
0.5806
p.K2098N
DO43362
UCEC
ICGC
KKENR
DEG_APCC_KENBOX_2
0.5806
p.R2102H
TCGA-EO-A22R
UCEC
TCGA
KKENR
DEG_APCC_KENBOX_2
0.7133
p.R2102H
DO42713
UCEC
ICGC
KKENR
DEG_APCC_KENBOX_2
0.7133
p.K2089N
DO229275
THCA
ICGC
KKENR
DEG_APCC_KENBOX_2
0.1944
p.G2103S
SIDM00407
B-Cell Non-Hodgkin's Lymphoma
GDSC
KKENR
DEG_APCC_KENBOX_2
0.3056
p.G2103S
ACH-000611
Lymphoma
CCLE
KKENR
DEG_APCC_KENBOX_2
0.3056
p.G2103S
SU-DHL-6
haematopoietic_and_lymphoid_tissue
COSMIC
KKENR
DEG_APCC_KENBOX_2
0.3056
p.M2112I
ACH-000851
Lung Cancer
CCLE
KKENR
DEG_APCC_KENBOX_2
0.0556
Drug responses associated with TNRC18 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of KKENR
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q70EL4
Ubiquitin carboxyl-terminal hydrolase 43
DEG_APCC_KENBOX_2
1005:1009
KKENR
APC,CDC20,FZR1
0.9715
More...
O15417
Trinucleotide repeat-containing gene 18 protein
DEG_APCC_KENBOX_2
2098:2102
KKENR
APC,CDC20,FZR1
0.5707
More...